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Putative Salmonella enterica subsp. enterica serovar Typhimurium AB42142 RM systems
Ref: Cohen,E. et al. unpublished
REBASE ref # 31885
Complete sequence: 4,855,068 bp
GenBank #: CP064916
REBASE acronym: Sen42142
Org_num: 46931
All begin IRY60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
23300 | endoribonuclease SymE | |||
23305 | S | S.Sen42086ORF23310P (100% identity) | GAGNNNNNNRTAYG | S.Sen42142ORF23310P |
23310 | M | M.Sen42052ORF23265P (100% identity) | GAGNNNNNNRTAYG | M.Sen42142ORF23310P |
23315 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | Sen42142ORF23310P |
23320 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
10290 | drug/metabolite exporter YedA | |||
10295 | V | V.Sen42086DcmP (100% identity) | V.Sen42142DcmP | |
10300 | M | M.Sen42086DcmP (100% identity) | CCWGG | M.Sen42142DcmP |
10305 | phosphohydrolase | |||
10545 | RusA family crossover junction | |||
10550 | M | M.StyUK1V (100% identity) | GATC | M.Sen42142ORF10550P |
10555 | PerC family transcriptional regulator | |||
13890 | 92 aa hypothetical protein | |||
13895 | M | M.Sen42052ORF13890P (99% identity) | M.Sen42142ORF13895P | |
13900 | ead/Ea22-like family protein | |||
17520 | DNA-binding transcriptional regulator Fis | |||
17525 | M | M.Sen42086ORF17555P (100% identity) | ATGCAT | M.Sen42142ORF17525P |
17530 | DUF2556 family protein | |||
21100 | cell division protein DamX | |||
21105 | M | M.StyTDamP (100% identity) | GATC | M.Sen42142DamP |
21110 | ribulose-phosphate 3-epimerase | |||
23145 | AAA family ATPase | |||
23150 | RM | Sen42086ORF23155P (99% identity) | GATCAG | Sen42142ORF23150P |
23155 | BREX system P-loop protein BrxC | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2160 | MFS transporter | |||
2165 | M | M.Sen42086ORF2150P (99% identity) | CAGAG | M.Sen42142ORF2165P |
2170 | R | Sen42052ORF2140P (99% identity) | CAGAG | Sen42142ORF2165P |
2175 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
23120 | ATP-binding protein | |||
23125 | R | Sen42086MrrP (100% identity) | Sen42142MrrP | |
23130 | protease Lon-related BREX system protein BrxL | |||
23315 | type I restriction-modification system | |||
23320 | R | Sen42086Mrr2P (99% identity) | Sen42142Mrr2P | |
23325 | BrnT family toxin |