Salmonella enterica subsp. enterica serovar Typhimurium CVM 28321-b |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM 28321-b RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,884,345 bp | CP051363 |
| plasmid p28321b-2: | 107,602 bp | CP051364 |
REBASE acronym: Sen28321b
Org_num: 46937
All begin HFS62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20105 | restriction endonuclease | |||
| 20110 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen28321bORF20115P |
| 20115 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen28321bORF20115P |
| 20120 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen28321bORF20115P |
| 20125 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1835 | cell division protein DamX | |||
| 1840 | M | M.StyTDamP (100% identity) | GATC | M.Sen28321bDamP |
| 1845 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen28321bORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 8960 | PerC family transcriptional regulator | |||
| 8965 | M | M.StyUK1V (100% identity) | GATC | M.Sen28321bORF8965P |
| 8970 | RusA family crossover junction | |||
| 9205 | phosphohydrolase | |||
| 9210 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen28321bDcmP |
| 9215 | V | V.StyUK1DcmP (100% identity) | V.Sen28321bDcmP | |
| 9220 | drug/metabolite exporter YedA | |||
| 20265 | BREX system P-loop protein BrxC | |||
| 20270 | RM | StyUK1IV (100% identity) | GATCAG | Sen28321bORF20270P |
| 20275 | AAA family ATPase | |||
| plasmid p28321b-2 | ||||
| 23760 | 118 aa hypothetical protein | |||
| 23765 | M | M.StyUK1ORFAP (100% identity) | M.Sen28321bORF23765P | |
| 23770 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17600 | 33 aa hypothetical protein | |||
| 17605 | R | StyUK1IP (99% identity) | CAGAG | Sen28321bORF17610P |
| 17610 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen28321bORF17610P |
| 17615 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20100 | BrnT family toxin | |||
| 20105 | R | StyUK1MrrP (100% identity) | Sen28321bMrr2P | |
| 20110 | type I restriction-modification system | |||