Pseudomonas species SDM007 |
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Putative Pseudomonas species SDM007 RM systems
Ref: Turner,T.L. et al. unpublished
REBASE ref # 32286
| Sequence length: | GenBank #: | |
| Chromosome: | 6,037,020 bp | CP070506 |
| plasmid pSDM007: | 249,868 bp | CP070507 |
REBASE acronym: PspM007
Org_num: 48800
All begin JTY93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3505 | restriction endonuclease | |||
| 3510 | S | S.PspS34ORF25965P (56% identity) | S.PspM007ORF3515P | |
| 3515 | M | M.PflPS006ORF355P (99% identity) | M.PspM007ORF3515P | |
| 3520 | DNA binding domain-containing protein | |||
| 3525 | R | Pfl3636ORF11905P (97% identity) | PspM007ORF3515P | |
| 3530 | 132 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10920 | DUF4224 domain-containing protein | |||
| 10925 | M | M.Psp818ORF8355P (96% identity) | M.PspM007ORF10925P | |
| 10930 | 116 aa hypothetical protein | |||
| 11140 | lysis protein | |||
| 11145 | M | M.Psp32bORF8005P (97% identity) | M.PspM007ORF11145P | |
| 11150 | 61 aa hypothetical protein | |||
| 11205 | 79 aa hypothetical protein | |||
| 11210 | R | Psp2196ORF14200P (84% identity) | PspM007ORF11210P | |
| 11215 | 151 aa hypothetical protein | |||
| 19405 | 117 aa hypothetical protein | |||
| ??? | R | Psp597ORF29840P (97% identity) | PspM007ORFAP | |
| 19410 | 125 aa hypothetical protein | |||
| 19455 | DUF262 domain-containing protein | |||
| 19460 | RM | Psp380ORF16470P (30% identity) | PspM007ORF19460BP | |
| 19465 | IS30-like element ISShes10 family transposase | |||
| 19470 | RM | PspTMP25ORF10815P (39% identity) | PspM007ORF19460AP | |
| 19475 | 209 aa hypothetical protein | |||
| plasmid pSDM007 | ||||
| 27720 | 80 aa hypothetical protein | |||
| 27725 | M | M.Psp8385ORF440P (99% identity) | M.PspM007ORF27725P | |
| 27730 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3500 | chalcone isomerase family protein | |||
| 3505 | R | PspBACMrrP (96% identity) | PspM007MrrP | |
| 3510 | restriction endonuclease subunit S | |||