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Putative Escherichia coli FDAARGOS_1296 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
Sequence length: | GenBank #: | |
Chromosome: | 4,876,119 bp | CP070066 |
plasmid unnamed1: | 123,092 bp | CP070067 |
REBASE acronym: Eco1296
Org_num: 46628
All begin I6K26_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20505 | adenine/cytosine-specific restriction | |||
20510 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco1296ORF20515P |
20515 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco1296ORF20515P |
20520 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco1296ORF20515P |
20525 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2335 | cell division protein DamX | |||
2340 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1296DamP |
2345 | ribulose-phosphate 3-epimerase | |||
2935 | DUF2556 family protein | |||
2940 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1296ORF2940P |
2945 | DNA-binding transcriptional regulator Fis | |||
6225 | PerC family transcriptional regulator | |||
6230 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco1296ORF6230P |
6235 | LexA family transcriptional regulator | |||
10190 | phosphohydrolase | |||
10195 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco1296DcmP |
10200 | V | V.SflC32DcmP (74% identity) | V.Eco1296DcmP | |
10205 | drug/metabolite exporter YedA | |||
13445 | DUF1737 domain-containing protein | |||
13465 | M | M.SboBSORF1444P (100% identity) | A | M.Eco1296ORF13465P |
13470 | TrmB family transcriptional regulator | |||
20755 | HNH endonuclease | |||
20760 | R | Ecoi127aORF4076P (100% identity) | Eco1296ORF20760P | |
20765 | 59 aa hypothetical protein | |||
plasmid unnamed1 | ||||
23575 | 73 aa hypothetical protein | |||
23580 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1296ORF23580P |
23585 | 103 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6425 | recombinase family protein | |||
6430 | R | EspFAAGmrSDP (100% identity) | Eco1296GmrSDP | |
6435 | DinI-like family protein | |||
20500 | GTPase | |||
20505 | R | EcosS1MrrP (100% identity) | Eco1296MrrP | |
20510 | type I restriction-modification system | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
14330 | NinE family protein | |||
14335 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1296ORF14335P |
14340 | recombination protein NinB |