Escherichia coli O157:H7 FLT_2000A |
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Putative Escherichia coli O157:H7 FLT_2000A RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,498,832 bp | CP051824 |
| plasmid pFLT_2000A-1: | 92,703 bp | CP051826 |
REBASE acronym: Eco2000A
Org_num: 46678
All begin HH258_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3045 | endoribonuclease SymE | |||
| 3050 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2000AORF3055P |
| 3055 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2000AORF3055P |
| 3060 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2000AORF3055P |
| 3065 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2785 | transposase | |||
| 2790 | R | Ecos1613ORF26795P (100% identity) | Eco2000AORF2790P | |
| 2795 | N-acetylneuraminate epimerase | |||
| 2825 | DEAD/DEAH box helicase | |||
| 2830 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2000AORF2830P |
| 9820 | recombination protein NinB | |||
| 9825 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco2000AORF9825P |
| 9830 | NinE family protein | |||
| 12190 | TrmB family transcriptional regulator | |||
| 12195 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2000AORF12195P | |
| 12210 | DUF1737 domain-containing protein | |||
| 12595 | TrmB family transcriptional regulator | |||
| 12600 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2000AORF12600P | |
| 12605 | DUF1737 domain-containing protein | |||
| 13395 | 81 aa hypothetical protein | |||
| 13400 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco2000AORF13400P | |
| 13405 | 329 aa hypothetical protein | |||
| 13410 | R | Ecos15739ORF2910P (100% identity) | Eco2000AORF13400P | |
| 13415 | DUF1367 family protein | |||
| 17165 | drug/metabolite exporter YedA | |||
| 17170 | V | V.Eco611DcmP (100% identity) | V.Eco2000ADcmP | |
| 17175 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2000ADcmP |
| 17180 | phosphohydrolase | |||
| 18565 | NinE family protein | |||
| 18570 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2000AORF18570P |
| 18575 | recombination protein NinB | |||
| 24480 | DNA-binding transcriptional regulator Fis | |||
| 24485 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2000AORF24485P |
| 24490 | DUF2556 family protein | |||
| 25000 | ribulose-phosphate 3-epimerase | |||
| 25005 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2000ADamP |
| 25010 | cell division protein DamX | |||
| plasmid pFLT_2000A-1 | ||||
| 27580 | 101 aa hypothetical protein | |||
| 27585 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2000AORF27585P | |
| 27590 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3030 | DUF1127 domain-containing protein | |||
| 3035 | R | Ecos1613GmrSP (100% identity) | Eco2000AGmrSP | |
| 3040 | R | EcosPA8GmrSDP (55% identity) | Eco2000AGmrDP | |
| 3045 | endoribonuclease SymE | |||