Escherichia coli O157:H7 FLT_2005F |
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Putative Escherichia coli O157:H7 FLT_2005F RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,485,337 bp | CP051814 |
| plasmid pFLT_2005F-1: | 94,594 bp | CP051815 |
REBASE acronym: Eco2005F
Org_num: 46682
All begin HH254_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24100 | DUF262 domain-containing protein | |||
| 24105 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2005FORF24110P |
| 24110 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2005FORF24110P |
| 24115 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2005FORF24110P |
| 24120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2005FDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2005FORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 7460 | DUF1382 family protein | |||
| 7465 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco2005FORF7465P |
| 7470 | 55 aa hypothetical protein | |||
| 7640 | endonuclease | |||
| 7645 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco2005FORF7645P |
| 7650 | NinE family protein | |||
| 10365 | recombination protein NinB | |||
| 10370 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2005FORF10370P |
| 10375 | NinE family protein | |||
| 11180 | phosphohydrolase | |||
| 11185 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2005FDcmP |
| 11190 | V | V.EcosPA8DcmP (100% identity) | V.Eco2005FDcmP | |
| 11195 | drug/metabolite exporter YedA | |||
| 15455 | DUF1737 domain-containing protein | |||
| 15470 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2005FORF15470P | |
| 15475 | TrmB family transcriptional regulator | |||
| 24335 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2005FORF24335P |
| 24340 | DEAD/DEAH box helicase | |||
| 24370 | N-acetylneuraminate epimerase | |||
| 24375 | R | EcosPA8ORF17350P (100% identity) | Eco2005FORF24375P | |
| 24380 | transposase | |||
| plasmid pFLT_2005F-1 | ||||
| 27550 | 101 aa hypothetical protein | |||
| 27555 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2005FORF27555P | |
| 27560 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24120 | endoribonuclease SymE | |||
| 24125 | R | EcosPA8GmrSDP (55% identity) | Eco2005FGmrDP | |
| 24130 | R | Ecos1613GmrSP (100% identity) | Eco2005FGmrSP | |
| 24135 | DUF1127 domain-containing protein | |||