Shigella boydii FDAARGOS_1139 |
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Putative Shigella boydii FDAARGOS_1139 RM systems
Ref: Sproer,C. et al. unpublished
REBASE ref # 31614
Complete sequence: 4,412,414 bp
GenBank #: CP068090
REBASE acronym: Sbo1139
Org_num: 49166
All begin I6I96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13315 | IS3 family transposase | |||
| 13320 | R | Sfl714ORF7650P (100% identity) | GGANNNNNNCTTT | Sbo1139ORF13325P |
| 13325 | M | M.Sfl714ORF7650P (100% identity) | GGANNNNNNCTTT | M.Sbo1139ORF13325P |
| 13330 | S | S.Sfl714ORF7650P (100% identity) | GGANNNNNNCTTT | S.Sbo1139ORF13325P |
| 13335 | 238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2005 | DUF1737 domain-containing protein | |||
| 2025 | M | M.Sfl714ORF19235P (100% identity) | M.Sbo1139ORF2025P | |
| 2030 | IS1 family transposase | |||
| 8740 | DNA-binding transcriptional regulator Fis | |||
| 8745 | M | M.Sbo9770ORFAP (100% identity) | ATGCAT | M.Sbo1139ORF8745P |
| 8750 | DUF2556 family protein | |||
| 9345 | ribulose-phosphate 3-epimerase | |||
| 9350 | M | M.UbaC1152DamP (100% identity) | GATC | M.Sbo1139DamP |
| 9355 | cell division protein DamX | |||
| 14280 | 59 aa hypothetical protein | |||
| 14285 | R | Sfl714ORF7695P (100% identity) | Sbo1139ORF14285P | |
| 14290 | HNH endonuclease | |||
| 19530 | IS3 family transposase | |||
| 19535 | M | M.Sfl714ORF12335P (100% identity) | M.Sbo1139ORF19535P | |
| 19540 | replication endonuclease | |||
| 20280 | phosphohydrolase | |||
| 20285 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Sbo1139DcmP |
| 20290 | V | V.SsoST152DcmP (100% identity) | V.Sbo1139DcmP | |
| 20295 | drug/metabolite exporter YedA | |||