Salmonella enterica subsp. enterica serovar Uganda CVM 22436 |
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Putative Salmonella enterica subsp. enterica serovar Uganda CVM 22436 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,841,666 bp | CP051398 |
| plasmid p22436-1: | 183,507 bp | CP051400 |
| plasmid p22436-2: | 4,198 bp | CP051399 |
REBASE acronym: Sen22436
Org_num: 46948
All begin HFQ88_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | PerC family transcriptional regulator | |||
| 1810 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen22436ORF1810P |
| 1815 | LexA family transcriptional regulator | |||
| 1840 | 67 aa hypothetical protein | |||
| 1845 | M | M.SflLIN17ORF17405P (100% identity) | M.Sen22436ORF1845P | |
| 1850 | phage holin, lambda family | |||
| 3150 | BREX-1 system phosphatase PglZ type A | |||
| 3155 | RM | SenRM018ORF20380P (100% identity) | Sen22436ORF3155P | |
| 3160 | DUF262 domain-containing protein | |||
| 3310 | adenosine deaminase | |||
| 3315 | R | SenXORF20240P (100% identity) | Sen22436ORF3315P | |
| 3320 | YebC/PmpR family DNA-binding transcriptional | |||
| 14085 | drug/metabolite exporter YedA | |||
| 14090 | V | V.StyUK1DcmP (100% identity) | V.Sen22436DcmP | |
| 14095 | M | M.SenRM018DcmP (100% identity) | CCWGG | M.Sen22436DcmP |
| 14100 | phosphohydrolase | |||
| 20075 | replication endonuclease | |||
| 20080 | M | M.SenS321ORF3270P (100% identity) | M.Sen22436ORF20080P | |
| 20085 | DUF3850 domain-containing protein | |||
| 21195 | DNA-binding transcriptional regulator Fis | |||
| 21200 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22436ORF21200P |
| 21205 | DUF2556 family protein | |||
| 21685 | ribulose-phosphate 3-epimerase | |||
| 21690 | M | M.StyTDamP (100% identity) | GATC | M.Sen22436DamP |
| 21695 | cell division protein DamX | |||
| plasmid p22436-1 | ||||
| 23795 | 100 aa hypothetical protein | |||
| 23800 | M | M.YrupYR1ORFCP (100% identity) | M.Sen22436ORF23800P | |
| 23805 | 143 aa hypothetical protein | |||
| plasmid p22436-2 | ||||
| 23550 | R | SenL0026ORF25150P (95% identity) | CCNGG | Sen22436ORF23545P |
| 23555 | 123 aa hypothetical protein | |||
| 23560 | Rop family plasmid primer RNA-binding protein | |||
| 23545 | M | M.SflFF34ORF24420P (100% identity) | CCNGG | M.Sen22436ORF23545P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5660 | MFS transporter | |||
| 5665 | M | M.SenRM018ORF17855P (100% identity) | CAGAG | M.Sen22436ORF5665P |
| 5670 | R | StyUK1IP (99% identity) | CAGAG | Sen22436ORF5665P |
| 5675 | 33 aa hypothetical protein | |||