Salmonella enterica subsp. enterica serovar Typhimurium CVM 24350 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM 24350 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,860,673 bp | CP051386 |
| plasmid p24350-2: | 120,420 bp | CP051388 |
REBASE acronym: Sen24350
Org_num: 46934
All begin HFR97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19890 | restriction endonuclease | |||
| 19895 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen24350ORF19900P |
| 19900 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen24350ORF19900P |
| 19905 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen24350ORF19900P |
| 19910 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen24350DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24350ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 9235 | phosphohydrolase | |||
| 9240 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen24350DcmP |
| 9245 | V | V.StyUK1DcmP (100% identity) | V.Sen24350DcmP | |
| 9250 | drug/metabolite exporter YedA | |||
| 20050 | BREX system P-loop protein BrxC | |||
| 20055 | RM | StyUK1IV (100% identity) | GATCAG | Sen24350ORF20055P |
| 20060 | AAA family ATPase | |||
| plasmid p24350-2 | ||||
| 24565 | IS1 family transposase | |||
| 24570 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Sen24350ORF24570P |
| 24575 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen24350ORF24570P |
| 24580 | IS6-like element IS26 family transposase | |||
| 24770 | 103 aa hypothetical protein | |||
| 24775 | M | M.SenS318ORF60P (100% identity) | M.Sen24350ORF24775P | |
| 24780 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17370 | 33 aa hypothetical protein | |||
| 17375 | R | StyUK1IP (99% identity) | CAGAG | Sen24350ORF17380P |
| 17380 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen24350ORF17380P |
| 17385 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19885 | BrnT family toxin | |||
| 19890 | R | StyUK1MrrP (100% identity) | Sen24350Mrr2P | |
| 19895 | type I restriction-modification system | |||