Salmonella enterica subsp. enterica serovar Typhimurium CVM 24362 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM 24362 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,870,722 bp | CP051380 |
| plasmid p24362-1: | 224,721 bp | CP051379 |
| plasmid p24362-2: | 94,046 bp | CP051377 |
REBASE acronym: Sen24362
Org_num: 46935
All begin HFS07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22295 | restriction endonuclease | |||
| 22300 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen24362ORF22305P |
| 22305 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen24362ORF22305P |
| 22310 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen24362ORF22305P |
| 22315 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4020 | cell division protein DamX | |||
| 4025 | M | M.StyTDamP (100% identity) | GATC | M.Sen24362DamP |
| 4030 | ribulose-phosphate 3-epimerase | |||
| 4515 | DUF2556 family protein | |||
| 4520 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24362ORF4520P |
| 4525 | DNA-binding transcriptional regulator Fis | |||
| 11145 | PerC family transcriptional regulator | |||
| 11150 | M | M.StyUK1V (100% identity) | GATC | M.Sen24362ORF11150P |
| 11155 | RusA family crossover junction | |||
| 11390 | phosphohydrolase | |||
| 11395 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen24362DcmP |
| 11400 | V | V.StyUK1DcmP (100% identity) | V.Sen24362DcmP | |
| 11405 | drug/metabolite exporter YedA | |||
| 22455 | BREX system P-loop protein BrxC | |||
| 22460 | RM | StyUK1IV (100% identity) | GATCAG | Sen24362ORF22460P |
| 22465 | AAA family ATPase | |||
| plasmid p24362-1 | ||||
| 710 | DNA-binding protein | |||
| 715 | M | M.Ype21801ORF197P (100% identity) | M.Sen24362ORF715P | |
| 720 | 273 aa hypothetical protein | |||
| 1175 | 56 aa hypothetical protein | |||
| 1180 | M | M.Sens770ORF21675P (100% identity) | M.Sen24362ORF1180P | |
| 1185 | thermonuclease family protein | |||
| plasmid p24362-2 | ||||
| 40 | 118 aa hypothetical protein | |||
| 45 | M | M.StyUK1ORFAP (100% identity) | M.Sen24362ORF45P | |
| 50 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19790 | 33 aa hypothetical protein | |||
| 19795 | R | StyUK1IP (99% identity) | CAGAG | Sen24362ORF19800P |
| 19800 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen24362ORF19800P |
| 19805 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22290 | BrnT family toxin | |||
| 22295 | R | StyUK1MrrP (100% identity) | Sen24362Mrr2P | |
| 22300 | type I restriction-modification system | |||