Salmonella enterica subsp. enterica serovar Worthington CVM 30148 |
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Putative Salmonella enterica subsp. enterica serovar Worthington CVM 30148 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,974,390 bp | CP051353 |
| plasmid p30148-1: | 104,600 bp | CP051354 |
REBASE acronym: Sen30148
Org_num: 46966
All begin HFS90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20810 | restriction endonuclease | |||
| 20815 | R | SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | Sen30148ORF20820P |
| 20820 | M | M.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | M.Sen30148ORF20820P |
| 20825 | S | S.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | S.Sen30148ORF20820P |
| 20830 | endoribonuclease SymE | |||
| 21035 | DUF945 domain-containing protein | |||
| 21040 | R | SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | Sen30148ORF21045P |
| 21045 | M | M.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | M.Sen30148ORF21045P |
| 21050 | S | S.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | S.Sen30148ORF21045P |
| 21055 | 355 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.SenSW70DamP (100% identity) | GATC | M.Sen30148DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.SenSW70ORF2260P (100% identity) | ATGCAT | M.Sen30148ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 6315 | DUF4060 family protein | |||
| 6320 | M | M.SenSW70ORF5830P (100% identity) | M.Sen30148ORF6320P | |
| 6325 | YqaJ viral recombinase family protein | |||
| 7625 | DUF4222 domain-containing protein | |||
| 7630 | M | M2.Sen71952ORF13755P (100% identity) | M1.Sen30148ORF7630P | |
| 7635 | TraR/DksA family transcriptional regulator | |||
| 7640 | M | M2.SenRM074ORF7060P (99% identity) | M2.Sen30148ORF7630P | |
| 7645 | 55 aa hypothetical protein | |||
| 10040 | phosphohydrolase | |||
| 10045 | M | M.SenSW70Dcm2P (100% identity) | CCWGG | M.Sen30148DcmP |
| 10050 | V | V.StyUK1DcmP (100% identity) | V.Sen30148DcmP | |
| 10055 | drug/metabolite exporter YedA | |||
| 14375 | LexA family transcriptional regulator | |||
| 14380 | M | M.SenSW70ORF13270P (100% identity) | M1.Sen30148ORF14380P | |
| 14385 | M | M.SenSW70ORF13275P (100% identity) | M2.Sen30148ORF14380P | |
| 14390 | PerC family transcriptional regulator | |||
| 20950 | YebC/PmpR family DNA-binding transcriptional | |||
| 20955 | R | SenSW70ORF19560P (100% identity) | Sen30148ORF20955P | |
| 20960 | 64 aa hypothetical protein | |||
| 21060 | 5-nucleotidase | |||
| 21065 | R | SenSW70ORF19670P (100% identity) | Sen30148ORF21065P | |
| 21070 | helix-turn-helix transcriptional regulator | |||
| plasmid p30148-1 | ||||
| 24380 | 104 aa hypothetical protein | |||
| 24385 | M | M.SspPIBORF23080P (100% identity) | M.Sen30148ORF24385P | |
| 24390 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18580 | 33 aa hypothetical protein | |||
| 18585 | R | SenWC80ORFAP (99% identity) | CAGAG | Sen30148ORF18590P |
| 18590 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen30148ORF18590P |
| 18595 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20805 | BrnT family toxin | |||
| 20810 | R | StyTMrrP (100% identity) | Sen30148MrrP | |
| 20815 | type I restriction-modification system | |||