Salmonella enterica subsp. enterica serovar Worthington CVM 33836 |
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Putative Salmonella enterica subsp. enterica serovar Worthington CVM 33836 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,915,330 bp | CP051338 |
| plasmid p33836-1: | 330,859 bp | CP051332 |
| plasmid p33836-2: | 159,544 bp | CP051335 |
REBASE acronym: Sen33836
Org_num: 46967
All begin HFT59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6000 | 355 aa hypothetical protein | |||
| 6005 | S | S.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | S.Sen33836ORF6010P |
| 6010 | M | M.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | M.Sen33836ORF6010P |
| 6015 | R | SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | Sen33836ORF6010P |
| 6020 | DUF945 domain-containing protein | |||
| 6225 | endoribonuclease SymE | |||
| 6230 | S | S.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | S.Sen33836ORF6235P |
| 6235 | M | M.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | M.Sen33836ORF6235P |
| 6240 | R | SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | Sen33836ORF6235P |
| 6245 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5985 | helix-turn-helix transcriptional regulator | |||
| 5990 | R | SenSW70ORF19670P (100% identity) | Sen33836ORF5990P | |
| 5995 | 5-nucleotidase | |||
| 6095 | 64 aa hypothetical protein | |||
| 6100 | R | SenSW70ORF19560P (100% identity) | Sen33836ORF6100P | |
| 6105 | YebC/PmpR family DNA-binding transcriptional | |||
| 12725 | PerC family transcriptional regulator | |||
| 12730 | M | M.SenSW70ORF13275P (100% identity) | M1.Sen33836ORF12730P | |
| 12735 | M | M.SenSW70ORF13270P (100% identity) | M2.Sen33836ORF12730P | |
| 12740 | LexA family transcriptional regulator | |||
| 16870 | drug/metabolite exporter YedA | |||
| 16875 | V | V.StyUK1DcmP (100% identity) | V.Sen33836DcmP | |
| 16880 | M | M.SenSW70Dcm2P (100% identity) | CCWGG | M.Sen33836DcmP |
| 16885 | phosphohydrolase | |||
| 19230 | 55 aa hypothetical protein | |||
| 19235 | M | M2.SenRM074ORF7060P (100% identity) | M1.Sen33836ORF19235P | |
| 19240 | TraR/DksA family transcriptional regulator | |||
| 19245 | M | M.Sen7830ORF20120P (100% identity) | M2.Sen33836ORF19235P | |
| 19250 | DUF4222 domain-containing protein | |||
| 24330 | DNA-binding transcriptional regulator Fis | |||
| 24335 | M | M.SenSW70ORF2260P (100% identity) | ATGCAT | M.Sen33836ORF24335P |
| 24340 | DUF2556 family protein | |||
| 24820 | ribulose-phosphate 3-epimerase | |||
| 24825 | M | M.SenSW70DamP (100% identity) | GATC | M.Sen33836DamP |
| 24830 | cell division protein DamX | |||
| plasmid p33836-1 | ||||
| 535 | 202 aa hypothetical protein | |||
| 540 | M | M.YpsF1ORFBP (100% identity) | M.Sen33836ORF540P | |
| 545 | 48 aa hypothetical protein | |||
| 915 | thermonuclease family protein | |||
| 920 | M | M.YpsF1ORFCP (100% identity) | M.Sen33836ORF920P | |
| 925 | 55 aa hypothetical protein | |||
| 1695 | DNA-binding protein | |||
| 1700 | M | M.YpsF1ORFDP (100% identity) | M.Sen33836ORF1700P | |
| 1705 | 277 aa hypothetical protein | |||
| plasmid p33836-2 | ||||
| 2025 | 103 aa hypothetical protein | |||
| 2030 | M | M.SenS318ORF60P (100% identity) | M.Sen33836ORF2030P | |
| 2035 | 73 aa hypothetical protein | |||
| 2685 | IS1 family transposase | |||
| 2690 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Sen33836ORF2690P |
| 2695 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen33836ORF2690P |
| 2700 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8465 | MFS transporter | |||
| 8470 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen33836ORF8470P |
| 8475 | R | StyUK1IP (99% identity) | CAGAG | Sen33836ORF8470P |
| 8480 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6240 | type I restriction-modification system | |||
| 6245 | R | StyTMrrP (100% identity) | Sen33836MrrP | |
| 6250 | BrnT family toxin | |||