Salmonella enterica subsp. enterica serovar Typhimurium CVM 28321-a |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM 28321-a RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,884,266 bp | CP053051 |
| plasmid p28321a-1: | 219,745 bp | CP053053 |
| plasmid p28321a-2: | 94,046 bp | CP053054 |
REBASE acronym: Sen28321
Org_num: 46936
All begin HFS61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20485 | restriction endonuclease | |||
| 20490 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen28321ORF20495P |
| 20495 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen28321ORF20495P |
| 20500 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen28321ORF20495P |
| 20505 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2220 | cell division protein DamX | |||
| 2225 | M | M.StyTDamP (100% identity) | GATC | M.Sen28321DamP |
| 2230 | ribulose-phosphate 3-epimerase | |||
| 2715 | DUF2556 family protein | |||
| 2720 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen28321ORF2720P |
| 2725 | DNA-binding transcriptional regulator Fis | |||
| 9340 | PerC family transcriptional regulator | |||
| 9345 | M | M.StyUK1V (100% identity) | GATC | M.Sen28321ORF9345P |
| 9350 | RusA family crossover junction | |||
| 9585 | phosphohydrolase | |||
| 9590 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen28321DcmP |
| 9595 | V | V.StyUK1DcmP (100% identity) | V.Sen28321DcmP | |
| 9600 | drug/metabolite exporter YedA | |||
| 20645 | BREX system P-loop protein BrxC | |||
| 20650 | RM | StyUK1IV (100% identity) | GATCAG | Sen28321ORF20650P |
| 20655 | AAA family ATPase | |||
| plasmid p28321a-1 | ||||
| 24480 | DNA-binding protein | |||
| 24485 | M | M.Ype21801ORF197P (100% identity) | M.Sen28321ORF24485P | |
| 24490 | 273 aa hypothetical protein | |||
| 24935 | 56 aa hypothetical protein | |||
| 24940 | M | M.Sens770ORF21675P (100% identity) | M.Sen28321ORF24940P | |
| 24945 | thermonuclease family protein | |||
| plasmid p28321a-2 | ||||
| 25490 | 118 aa hypothetical protein | |||
| 25495 | M | M.StyUK1ORFAP (100% identity) | M.Sen28321ORF25495P | |
| 25500 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17980 | 33 aa hypothetical protein | |||
| 17985 | R | StyUK1IP (99% identity) | CAGAG | Sen28321ORF17990P |
| 17990 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen28321ORF17990P |
| 17995 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20480 | BrnT family toxin | |||
| 20485 | R | StyUK1MrrP (100% identity) | Sen28321Mrr2P | |
| 20490 | type I restriction-modification system | |||