Streptomyces species SN-593 |
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Putative Streptomyces species SN-593 RM systems
Ref: Takahashi,S. et al. J Bacteriol 192 (11), 2839-2851 (2010)
REBASE ref # 32462
| Sequence length: | GenBank #: | |
| Chromosome: | 8,833,490 bp | AP018365 |
| plasmid pRVR1: | 93,381 bp | AP018366 |
REBASE acronym: Ssp593
Org_num: 49516
All begin RVR_, RVR_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4568 | 75 aa hypothetical protein | |||
| 4570 | R | Ssp510ORF11160P (91% identity) | Ssp593ORF4572P | |
| 4571 | S | S.PfrM32ORFBP (45% identity) | S.Ssp593ORF4572P | |
| 4572 | M | M.Sli41475ORFDP (84% identity) | M.Ssp593ORF4572P | |
| 4575 | 313 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4179 | 478 aa hypothetical protein | |||
| 4180 | M | M.SspY1DndAP (94% identity) | M.Ssp593DndAP | |
| ??? | DNA sulfur modification protein DndB | |||
| 4180 | cysteine desulfurase DndA | |||
| ??? | M | M.ScaNA4DndBP (92% identity) | M.Ssp593DndBP | |
| 4182 | sulfurtransferase DndC | |||
| ??? | DNA sulfur modification protein DndB | |||
| 4182 | M | M.SspY1DndCP (97% identity) | M.Ssp593DndCP | |
| 4183 | DNA sulfur modification protein DndD | |||
| 4182 | sulfurtransferase DndC | |||
| 4183 | M | M.SspY1DndDP (91% identity) | M.Ssp593DndDP | |
| 4184 | DNA sulfur modification protein DndE | |||
| 4183 | DNA sulfur modification protein DndD | |||
| 4184 | M | M.SspY1DndEP (96% identity) | M.Ssp593DndEP | |
| 4185 | transposase | |||
| 4468 | 275 aa hypothetical protein | |||
| 4470 | M | M.Sgr40191ORF4639P (58% identity) | M.Ssp593ORF4470P | |
| 4471 | 83 aa hypothetical protein | |||
| 5465 | 576 aa hypothetical protein | |||
| 5466 | M | M.Ssp8241ORFEP (62% identity) | M.Ssp593ORF5466P | |
| 5467 | serine/threonine protein kinase | |||
| 8430 | helicase | |||
| 8432 | M | M.Ssp210ORF9995P (94% identity) | M.Ssp593ORF8432P | |
| 8434 | 1128 aa hypothetical protein | |||
| plasmid pRVR1 | ||||
| 195 | 154 aa hypothetical protein | |||
| 196 | M | M.Ssp4231ORFFP (59% identity) | M.Ssp593ORF196P | |
| 197 | 118 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5438 | ribosylglycoyhydrolase | |||
| 5439 | R | Ssp464McrCP (78% identity) | Ssp593McrCP | |
| 5442 | R | Ssp464McrBP (77% identity) | Ssp593McrBP | |
| 5440 | glutamate synthase | |||