Salmonella enterica subsp. enterica serovar Westhampton CFSAN103867 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Westhampton CFSAN103867 RM systems
Ref: Maguire,M. et al. unpublished
REBASE ref # 31877
| Sequence length: | GenBank #: | |
| Chromosome: | 4,899,125 bp | CP065859 |
| plasmid pUWI-H17.1: | 308,749 bp | CP065860 |
REBASE acronym: Sen103867
Org_num: 46965
All begin HIX68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5405 | 291 aa hypothetical protein | |||
| 5410 | M | M.SenS12VPHORF19925P (100% identity) | M.Sen103867ORF5410P | |
| 5415 | S | S.SenS12VPHORF19925P (100% identity) | S.Sen103867ORF5410P | |
| 5420 | DUF91 domain-containing protein | |||
| 5425 | R | SenS12VPHORF19925P (100% identity) | Sen103867ORF5410P | |
| 5430 | 56 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1945 | cell division protein DamX | |||
| 1950 | M | M.StyTDamP (100% identity) | GATC | M.Sen103867DamP |
| 1955 | ribulose-phosphate 3-epimerase | |||
| 2435 | DUF2556 family protein | |||
| 2440 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen103867ORF2440P |
| 2445 | DNA-binding transcriptional regulator Fis | |||
| 3595 | DEAD/DEAH box helicase | |||
| 3600 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Sen103867ORF3600P |
| 3605 | transposase | |||
| 7475 | DUF4222 domain-containing protein | |||
| 7480 | M | M.SenSS209ORF4411P (100% identity) | M1.Sen103867ORF7480P | |
| 7485 | TraR/DksA family transcriptional regulator | |||
| 7490 | M | M.SenSS209ORF4413P (99% identity) | M2.Sen103867ORF7480P | |
| 7495 | 94 aa hypothetical protein | |||
| 14425 | drug/metabolite exporter YedA | |||
| 14430 | V | V.StyUK1DcmP (100% identity) | V.Sen103867DcmP | |
| 14435 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen103867DcmP |
| 14440 | phosphohydrolase | |||
| 20445 | YebC/PmpR family DNA-binding transcriptional | |||
| 20450 | R | SspZ54ORF13050P (100% identity) | Sen103867ORF20450P | |
| 20455 | phage tail tape measure protein | |||
| plasmid pUWI-H17.1 | ||||
| 24750 | 55 aa hypothetical protein | |||
| 24755 | M | M.Ssp15303DcmP (100% identity) | M.Sen103867Dcm2P | |
| 24760 | thermonuclease family protein | |||
| 25315 | DNA-binding protein | |||
| 25320 | M | M.Ssp15303ORFEP (100% identity) | M.Sen103867ORF25320P | |
| 25325 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3415 | inovirus Gp2 family protein | |||
| 3420 | R | SenLASSORF19350P (100% identity) | Sen103867ORF3425P | |
| 3425 | M | M.Sen5006ORF16245P (100% identity) | M.Sen103867ORF3425P | |
| 3430 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 18080 | 33 aa hypothetical protein | |||
| 18085 | R | StyUK1IP (99% identity) | CAGAG | Sen103867ORF18090P |
| 18090 | M | M.SspZ54ORF15425P (100% identity) | CAGAG | M.Sen103867ORF18090P |
| 18095 | MFS transporter | |||