Burkholderia humptydooensis FDAARGOS_899 |
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Putative Burkholderia humptydooensis FDAARGOS_899 RM systems
Ref: Nelson,B. et al. unpublished
REBASE ref # 31628
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,068,027 bp | CP065686 |
| chromosome 2: | 2,913,520 bp | CP065687 |
| plasmid unnamed: | 305,114 bp | CP065685 |
REBASE acronym: Bhu899
Org_num: 46155
All begin I6G56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14780 | 755 aa hypothetical protein | |||
| 14785 | M | M.Bth43ORFCP (100% identity) | GGANNNNNNNRTGGC | M.Bhu899ORF14785P |
| 14790 | S | S.Bth43ORFCP (98% identity) | GGANNNNNNNRTGGC | S.Bhu899ORF14785P |
| 14795 | R | Bth43ORFCP (100% identity) | GGANNNNNNNRTGGC | Bhu899ORF14785P |
| 14800 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1885 | IS5-like element ISButh5 family transposase | |||
| ??? | R | Bth43ORFBP (100% identity) | RGATCY | Bhu899ORF1895P |
| 1895 | M | M.Bth43ORFBP (100% identity) | RGATCY | M.Bhu899ORF1895P |
| 1900 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 15230 | phage tail assembly chaperone | |||
| 15235 | M | M.Bth43ORFDP (100% identity) | M.Bhu899ORF15235P | |
| 15240 | glycosyltransferase family 25 protein | |||
| 17800 | ATP-binding protein | |||
| 17805 | M | M.Bth1687ORFIP (100% identity) | M.Bhu899ORF17805P | |
| 17810 | helix-turn-helix domain-containing protein | |||
| 18165 | DEAD/DEAH box helicase | |||
| 18170 | RM | Bth43ORFKP (100% identity) | Bhu899ORF18170P | |
| 18175 | chromosome segregation protein SMC | |||
| chromosome 2 | ||||
| 22575 | 78 aa hypothetical protein | |||
| 22580 | M | M.Bth43ORFHP (73% identity) | M.Bhu899ORF22580P | |
| 22585 | phage virion morphogenesis protein | |||
| 22710 | DUF551 domain-containing protein | |||
| 22715 | M | M.Bth43ORFFP (94% identity) | M.Bhu899ORF22715P | |
| 22720 | 72 aa hypothetical protein | |||
| 26810 | RNA-directed DNA polymerase | |||
| 26815 | M | M.Bth43ORFNP (100% identity) | M.Bhu899ORF26815P | |
| 26820 | 75 aa hypothetical protein | |||
| 31995 | tryptophan synthase subunit beta | |||
| 32000 | M | M.Bth43ORFIP (100% identity) | GTWWAC | M.Bhu899ORF32000P |
| 32005 | tryptophan synthase subunit alpha | |||
| plasmid unnamed | ||||
| 675 | 259 aa hypothetical protein | |||
| 680 | M | M.Bth43ORFMP (100% identity) | M.Bhu899ORF680P | |
| 685 | conjugal transfer protein TraF | |||
| 895 | 169 aa hypothetical protein | |||
| 900 | M | M.Bth43ORFLP (69% identity) | M.Bhu899ORF900P | |
| 905 | 165 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1700 | porin | |||
| 1705 | M | M.Bth43ORFAP (99% identity) | CACAG | M.Bhu899ORF1705P |
| 1710 | R | Bth43ORFAP (100% identity) | CACAG | Bhu899ORF1705P |
| 1715 | porin | |||