Streptococcus suis YZDH1 |
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Putative Streptococcus suis YZDH1 RM systems
Ref: Huang,J. unpublished
REBASE ref # 24830
Complete sequence: 2,495,947 bp
GenBank #: CP065430
REBASE acronym: SsuYZDH1
Org_num: 49462
All begin I5V48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1080 | beta-lactamase family protein | |||
| 1085 | M | M.Ssu48ORF11100P (100% identity) | M.SsuYZDH1ORF1085P | |
| 1090 | S | S1.SsuS26ORF1170P (100% identity) | S1.SsuYZDH1ORF1085P | |
| 1095 | 1399 aa hypothetical protein | |||
| 1100 | holin-like toxin | |||
| 1105 | S | S2.SsuS26ORF1170P (100% identity) | S2.SsuYZDH1ORF1085P | |
| 1110 | R | Ssu48ORF11100P (100% identity) | SsuYZDH1ORF1085P | |
| 1115 | formate C-acetyltransferase | |||
| 2600 | restriction endonuclease subunit S | |||
| 2605 | R | Ssu48ORF8385P (99% identity) | SsuYZDH1ORF2625P | |
| 2610 | S | S3.SsuTJ575ORFGP (72% identity) | S3.SsuYZDH1ORF2625P | |
| 2615 | S | S2.Ssu48ORF8385P (100% identity) | S2.SsuYZDH1ORF2625P | |
| 2620 | S | S1.Ssu028ORF2375P (98% identity) | S1.SsuYZDH1ORF2625P | |
| 2625 | M | M.SsuC2ORF2690P (99% identity) | M.SsuYZDH1ORF2625P | |
| 2630 | serine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2100 | DUF1266 domain-containing protein | |||
| 2105 | M | M2.SsuYS77ORFBP (99% identity) | M1.SsuYZDH1ORF2105P | |
| 2110 | M | M1.SsuYS77ORFBP (100% identity) | M2.SsuYZDH1ORF2105P | |
| 2115 | R | SsuC2ORF2135P (100% identity) | SsuYZDH1ORF2105P | |
| 2120 | aminopeptidase P family protein | |||
| 2305 | 59 aa hypothetical protein | |||
| 2310 | M | M2.SsuTRG6ORFAP (100% identity) | M.SsuYZDH1ORF2310P | |
| 2315 | 99 aa hypothetical protein | |||
| 5690 | replication initiator protein A | |||
| 5695 | M | M.Ssu48ORF5605P (100% identity) | M.SsuYZDH1ORF5695P | |
| 5700 | 142 aa hypothetical protein | |||
| 6405 | zinc-ribbon domain-containing protein | |||
| 6410 | M | M1.SsuS26ORF6265P (100% identity) | M1.SsuYZDH1ORF6410P | |
| 6415 | 81 aa hypothetical protein | |||
| 6420 | M | M2.SsuS26ORF6265P (93% identity) | M2.SsuYZDH1ORF6410P | |
| 6425 | 279 aa hypothetical protein | |||
| 8800 | 428 aa hypothetical protein | |||
| 8805 | M | M.Ssu48ORF2145P (100% identity) | M.SsuYZDH1ORF8805P | |
| ??? | R | SsuAKJ18ORF8805P (99% identity) | SsuYZDH1ORF8805P | |
| 8815 | DUF4368 domain-containing protein | |||
| 9055 | MmcQ/YjbR family DNA-binding protein | |||
| 9060 | R | Ssu48ORF1890P (99% identity) | SsuYZDH1ORF9065P | |
| 9065 | M | M.Ssu48ORF1890P (100% identity) | M.SsuYZDH1ORF9065P | |
| 9070 | 264 aa hypothetical protein | |||
| 10585 | helix-turn-helix transcriptional regulator | |||
| 10590 | M | M.Ssu028ORF10195P (100% identity) | M.SsuYZDH1ORF10590P | |
| 10595 | 73 aa hypothetical protein | |||
| 10620 | 105 aa hypothetical protein | |||
| 10625 | M | M.Ssu028ORF10230P (100% identity) | M.SsuYZDH1ORF10625P | |
| 10630 | DNA cytosine methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4180 | DUF4391 domain-containing protein | |||
| 4185 | M | M.Ssu028ORF3970P (96% identity) | M.SsuYZDH1ORF4185P | |
| 4190 | 305 aa hypothetical protein | |||
| 4195 | R | Ssu48ORF4090P (100% identity) | SsuYZDH1ORF4185P | |
| 4200 | 248 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6470 | glutamine-hydrolyzing GMP synthase | |||
| 6475 | R | Ssu48McrCP (100% identity) | SsuYZDH1McrCP | |
| 6480 | R | Ssu48McrBP (100% identity) | SsuYZDH1McrBP | |
| 6485 | 261 aa hypothetical protein | |||