Streptococcus suis YP20190405 |
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Putative Streptococcus suis YP20190405 RM systems
Ref: Huang,J. unpublished
REBASE ref # 24830
Complete sequence: 2,144,810 bp
GenBank #: CP065431
REBASE acronym: Ssu405
Org_num: 49461
All begin I5W22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3325 | FAD-containing oxidoreductase | |||
| 3330 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | Ssu405ORF3335P |
| 3335 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.Ssu405ORF3335P |
| 3340 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.Ssu405ORF3335P |
| 3345 | 243 aa hypothetical protein | |||
| 6705 | ribose-5-phosphate isomerase RpiA | |||
| 6710 | S | S2.SsucSS389ORF6590P (100% identity) | S2.Ssu405ORF6720P | |
| 6715 | S | S2.SsuiS10ORFBP (100% identity) | S1.Ssu405ORF6720P | |
| 6720 | M | M.SsuiS10ORFBP (100% identity) | M.Ssu405ORF6720P | |
| 6725 | R | SsuiS10ORFBP (100% identity) | Ssu405ORF6720P | |
| 6730 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 8265 | serine--tRNA ligase | |||
| 8270 | M | M.SsuiS10ORFAP (100% identity) | M.Ssu405ORF8270P | |
| 8275 | S | S.SsuiS10ORFAP (100% identity) | S1.Ssu405ORF8270P | |
| 8280 | R | SsuiS10ORFAP (100% identity) | Ssu405ORF8270P | |
| 8285 | S | S2.SsucSS389ORF8140P (100% identity) | S2.Ssu405ORF8270P | |
| 8290 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4770 | 142 aa hypothetical protein | |||
| 4775 | M | M.SsuYZDH1ORF5695P (100% identity) | M.Ssu405ORF4775P | |
| 4780 | replication initiator protein A | |||
| 9625 | 142 aa hypothetical protein | |||
| 9630 | M | M.SsuYZDH1ORF5695P (100% identity) | M.Ssu405ORF9630P | |
| 9635 | replication initiator protein A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3270 | 126 aa hypothetical protein | |||
| ??? | M | M.SsuSs45ORF2350P (100% identity) | M.Ssu405ORF3275P | |
| 3285 | R | SsuiS10ORFEP (100% identity) | Ssu405ORF3275P | |
| 3290 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4065 | 262 aa hypothetical protein | |||
| 4070 | R | SsuiS10McrBP (100% identity) | Ssu405McrBP | |
| 4075 | R | SsucSS389McrCP (100% identity) | Ssu405McrCP | |
| 4080 | site-specific integrase | |||