Salmonella enterica subsp. enterica serovar Typhimurium S441 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S441 RM systems
Ref: Hua,X. and Yu,Y. unpublished
REBASE ref # 24129
| Sequence length: | GenBank #: | |
| Chromosome: | 4,944,769 bp | CP061122 |
| plasmid pS441: | 260,707 bp | CP061123 |
REBASE acronym: SenS441
Org_num: 46944
All begin IBY97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19880 | restriction endonuclease | |||
| 19885 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS441ORF19890P |
| 19890 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS441ORF19890P |
| 19895 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS441ORF19890P |
| 19900 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenS441DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS441ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 3225 | DUF2732 family protein | |||
| 3230 | M | M.SensSZL38ORF19965P (100% identity) | M.SenS441ORF3230P | |
| 3235 | replication endonuclease | |||
| 5380 | IS6-like element IS26 family transposase | |||
| 5385 | M | M.StyCORF187P (49% identity) | M.SenS441ORF5385P | |
| 5390 | thermonuclease family protein | |||
| 6010 | ead/Ea22-like family protein | |||
| 6015 | M | M.StyTORF1914P (100% identity) | M.SenS441ORF6015P | |
| 6020 | 92 aa hypothetical protein | |||
| 8450 | IS1 family transposase | |||
| 8455 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenS441ORF8455P |
| 8460 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenS441ORF8455P |
| 8465 | IS6-like element IS26 family transposase | |||
| 9485 | phosphohydrolase | |||
| 9490 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS441DcmP |
| 9495 | V | V.StyUK1DcmP (100% identity) | V.SenS441DcmP | |
| 9500 | drug/metabolite exporter YedA | |||
| 20040 | BREX system P-loop protein BrxC | |||
| 20045 | RM | StyUK1IV (100% identity) | GATCAG | SenS441ORF20045P |
| 20050 | AAA family ATPase | |||
| 21950 | LexA family transcriptional regulator | |||
| 21955 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenS441ORF21955P |
| 21960 | PerC family transcriptional regulator | |||
| plasmid pS441 | ||||
| 24575 | 55 aa hypothetical protein | |||
| 24580 | M | M.YpsF1ORFCP (100% identity) | M.SenS441ORF24580P | |
| 24585 | thermonuclease family protein | |||
| 25290 | 48 aa hypothetical protein | |||
| 25295 | M | M.YpsF1ORFBP (100% identity) | M.SenS441ORF25295P | |
| 25300 | 202 aa hypothetical protein | |||
| 25415 | DNA-binding protein | |||
| 25420 | M | M.YpsF1ORFDP (100% identity) | M.SenS441ORF25420P | |
| 25425 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17585 | 33 aa hypothetical protein | |||
| 17590 | R | StyUK1IP (99% identity) | CAGAG | SenS441ORF17595P |
| 17595 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS441ORF17595P |
| 17600 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19875 | BrnT family toxin | |||
| 19880 | R | StyUK1MrrP (100% identity) | SenS441Mrr2P | |
| 19885 | type I restriction-modification system | |||