Salmonella enterica subsp. enterica serovar Typhimurium S520 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S520 RM systems
Ref: Hua,X. and Yu,Y. unpublished
REBASE ref # 24129
| Sequence length: | GenBank #: | |
| Chromosome: | 5,038,289 bp | CP061119 |
| plasmid pS520_1: | 253,797 bp | CP061120 |
REBASE acronym: SenS520
Org_num: 46945
All begin IBY99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11635 | restriction endonuclease | |||
| 11640 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS520ORF11645P |
| 11645 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS520ORF11645P |
| 11650 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS520ORF11645P |
| 11655 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 985 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenS520ORF990P | |
| 995 | RusA family crossover junction | |||
| 1235 | phosphohydrolase | |||
| 1240 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS520DcmP |
| 1245 | V | V.StyUK1DcmP (100% identity) | V.SenS520DcmP | |
| 1250 | drug/metabolite exporter YedA | |||
| 11795 | BREX system P-loop protein BrxC | |||
| 11800 | RM | StyUK1IV (100% identity) | GATCAG | SenS520ORF11800P |
| 11805 | AAA family ATPase | |||
| 13715 | LexA family transcriptional regulator | |||
| 13720 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenS520ORF13720P |
| 13725 | PerC family transcriptional regulator | |||
| 17640 | cell division protein DamX | |||
| 17645 | M | M.StyTDamP (100% identity) | GATC | M.SenS520DamP |
| 17650 | ribulose-phosphate 3-epimerase | |||
| 18135 | DUF2556 family protein | |||
| 18140 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS520ORF18140P |
| 18145 | DNA-binding transcriptional regulator Fis | |||
| 19060 | DUF2732 family protein | |||
| 19065 | M | M.SensSZL38ORF19965P (100% identity) | M.SenS520ORF19065P | |
| 19070 | replication endonuclease | |||
| 21450 | IS6-like element IS26 family transposase | |||
| 21455 | M | M.StyCORF187P (49% identity) | M.SenS520ORF21455P | |
| 21460 | thermonuclease family protein | |||
| 22085 | ead/Ea22-like family protein | |||
| 22090 | M | M.StyTORF1914P (100% identity) | M.SenS520ORF22090P | |
| 22095 | 92 aa hypothetical protein | |||
| plasmid pS520_1 | ||||
| 25150 | 55 aa hypothetical protein | |||
| 25155 | M | M.YpsF1ORFCP (100% identity) | M.SenS520ORF25155P | |
| 25160 | thermonuclease family protein | |||
| 25835 | 48 aa hypothetical protein | |||
| 25840 | M | M.YpsF1ORFBP (100% identity) | M.SenS520ORF25840P | |
| 25845 | 202 aa hypothetical protein | |||
| 25955 | DNA-binding protein | |||
| 25960 | M | M.YpsF1ORFDP (100% identity) | M.SenS520ORF25960P | |
| 25965 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9335 | 33 aa hypothetical protein | |||
| 9340 | R | StyUK1IP (99% identity) | CAGAG | SenS520ORF9345P |
| 9345 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS520ORF9345P |
| 9350 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11630 | BrnT family toxin | |||
| 11635 | R | StyUK1MrrP (100% identity) | SenS520Mrr2P | |
| 11640 | type I restriction-modification system | |||