Salmonella enterica subsp. enterica serovar Typhimurium S585 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S585 RM systems
Ref: Hua,X. and Yu,Y. unpublished
REBASE ref # 24129
| Sequence length: | GenBank #: | |
| Chromosome: | 5,024,322 bp | CP061115 |
| plasmid pS585_1: | 284,303 bp | CP061116 |
REBASE acronym: SenS585
Org_num: 46946
All begin IBZ03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2815 | endoribonuclease SymE | |||
| 2820 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS585ORF2825P |
| 2825 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS585ORF2825P |
| 2830 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS585ORF2825P |
| 2835 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.SflFF38ORF15P (100% identity) | M.SenS585ORF15P | |
| 20 | 329 aa hypothetical protein | |||
| 1185 | PerC family transcriptional regulator | |||
| 1190 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenS585ORF1190P |
| 1195 | LexA family transcriptional regulator | |||
| 2665 | AAA family ATPase | |||
| 2670 | RM | StyUK1IV (100% identity) | GATCAG | SenS585ORF2670P |
| 2675 | BREX system P-loop protein BrxC | |||
| 4920 | PerC family transcriptional regulator | |||
| 4925 | M | M.Sens418ORF4945P (100% identity) | GATC | M.SenS585ORF4925P |
| 4930 | LexA family transcriptional regulator | |||
| 4955 | 92 aa hypothetical protein | |||
| 4960 | M | M.SensSZL38ORF10585P (100% identity) | M.SenS585ORF4960P | |
| 4965 | phage holin, lambda family | |||
| 13505 | drug/metabolite exporter YedA | |||
| 13510 | V | V.StyUK1DcmP (100% identity) | V.SenS585DcmP | |
| 13515 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS585DcmP |
| 13520 | phosphohydrolase | |||
| 13760 | RusA family crossover junction | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenS585ORF13765P | |
| 13770 | PerC family transcriptional regulator | |||
| 17085 | 92 aa hypothetical protein | |||
| 17090 | M | M.StyTORF1914P (100% identity) | M.SenS585ORF17090P | |
| 17095 | ead/Ea22-like family protein | |||
| 17475 | IS6-like element IS26 family transposase | |||
| 17480 | M | M.StyCORF187P (49% identity) | M.SenS585ORF17480P | |
| 17485 | thermonuclease family protein | |||
| 21175 | DNA-binding transcriptional regulator Fis | |||
| 21180 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS585ORF21180P |
| 21185 | DUF2556 family protein | |||
| 21670 | ribulose-phosphate 3-epimerase | |||
| 21675 | M | M.StyTDamP (100% identity) | GATC | M.SenS585DamP |
| 21680 | cell division protein DamX | |||
| plasmid pS585_1 | ||||
| 25510 | thermonuclease family protein | |||
| 25515 | M | M.YpsF1ORFCP (100% identity) | M.SenS585ORF25515P | |
| 25520 | 55 aa hypothetical protein | |||
| 25960 | 48 aa hypothetical protein | |||
| 25965 | M | M.YpsF1ORFBP (100% identity) | M.SenS585ORF25965P | |
| 25970 | 202 aa hypothetical protein | |||
| 26080 | DNA-binding protein | |||
| 26085 | M | M.YpsF1ORFDP (100% identity) | M.SenS585ORF26085P | |
| 26090 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5400 | MFS transporter | |||
| 5405 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS585ORF5405P |
| 5410 | R | StyUK1IP (99% identity) | CAGAG | SenS585ORF5405P |
| 5415 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2830 | type I restriction-modification system | |||
| 2835 | R | StyUK1MrrP (100% identity) | SenS585Mrr2P | |
| 2840 | BrnT family toxin | |||