Salmonella enterica subsp. enterica serovar Typhimurium LB5000 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium LB5000 RM systems
Ref: Zaworski,J. et al. unpublished
REBASE ref # 34795
| Sequence length: | GenBank #: | |
| Chromosome: | 4,796,208 bp | CP067397 |
| plasmid psLT: | 93,938 bp | CP067398 |
REBASE acronym: SenLB
Org_num: 45877
All begin JJB81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | MFS transporter | |||
| 1815 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenLBII |
| 1820 | R | Sen3625IIP (100% identity) | GAGNNNNNNRTAYG | SenLBIIP |
| 1825 | 33 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10225 | drug/metabolite exporter YedA | |||
| 10230 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenLBDcmP |
| 10235 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLBDcm |
| 10240 | phosphohydrolase | |||
| 17000 | DNA-binding transcriptional regulator Fis | |||
| 17005 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLBIV |
| 17010 | DUF2556 family protein | |||
| 17495 | ribulose-phosphate 3-epimerase | |||
| 17500 | M | M.StyTDamP (100% identity) | GATC | M.SenLBDam |
| 17505 | cell division protein DamX | |||
| 22585 | AAA family ATPase | |||
| 22590 | RM | StyUK1IV (100% identity) | GATCAG | SenLBORF22590P |
| 22595 | BREX system P-loop protein BrxC | |||
| plasmid psLT | ||||
| 23425 | 118 aa hypothetical protein | |||
| 23430 | M | M.StyUK1ORFAP (100% identity) | M.SenLBORF23430P | |
| 23435 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22735 | endoribonuclease SymE | |||
| 22740 | type-1 restriction enzyme StySJI specificity | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22750 | type I restriction-modification system | |||
| 22755 | R | StyUK1MrrP (100% identity) | SenLBMrrP | |
| 22760 | BrnT family toxin | |||