Salmonella enterica subsp. enterica serovar Typhimurium NCTC 74 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCTC 74 RM systems
Ref: Li,R. unpublished
REBASE ref # 31585
Complete sequence: 4,638,880 bp
GenBank #: CP064709
REBASE acronym: Sen74
Org_num: 42348
All begin IT784_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3600 | Fic family protein | |||
| 3605 | M | M.Sen7112ORF745P (31% identity) | M.Sen74ORF3605P | |
| 3610 | 121 aa hypothetical protein | |||
| 18975 | 322 aa hypothetical protein | |||
| 18980 | R | SenSmo02ORF2295P (100% identity) | CGAYNNNNNNNATGC | Sen74ORF18985P |
| 18985 | M | M.SenSmo02ORF2295P (99% identity) | CGAYNNNNNNNATGC | M.Sen74ORF18985P |
| 18990 | S | S.SenSmo02ORF2295P (100% identity) | CGAYNNNNNNNATGC | S.Sen74ORF18985P |
| 18995 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1700 | cell division protein DamX | |||
| 1705 | M | M.StyTDamP (100% identity) | GATC | M.Sen74DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2190 | DUF2556 family protein | |||
| 2195 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen74I |
| 2200 | DNA-binding transcriptional regulator Fis | |||
| 8655 | phosphohydrolase | |||
| 8660 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen74Dcm2P |
| 8665 | very short patch repair endonuclease | |||
| 8660 | DNA cytosine methyltransferase | |||
| 8665 | V | V.StyUK1DcmP (100% identity) | V.Sen74DcmP | |
| 8670 | drug/metabolite exporter YedA | |||
| 13540 | 112 aa hypothetical protein | |||
| 13545 | M | M.SenE40ORF14310P (100% identity) | M.Sen74ORF13545P | |
| 13550 | class I SAM-dependent methyltransferase | |||
| 13545 | DNA cytosine methyltransferase | |||
| 13550 | M | M.Sens29945ORF7975P (100% identity) | M1.Sen74ORF13550P | |
| 13555 | M | M2.Sens8812ORF14440P (100% identity) | M2.Sen74ORF13550P | |
| 13560 | 82 aa hypothetical protein | |||
| 19120 | YebC/PmpR family DNA-binding transcriptional | |||
| ??? | R | SenM4441ORF18165P (95% identity) | Sen74ORF19125P | |
| 19130 | helicase | |||
| 21220 | phage portal protein | |||
| 21225 | M | M.SenS710ORF16210P (100% identity) | TGGCCA | M.Sen74ORF21225P |
| 21230 | R | SenS710ORF16210P (100% identity) | TGGCCA | Sen74ORF21225P |
| 21235 | DinI-like family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16740 | 33 aa hypothetical protein | |||
| 16745 | R | Sens8899ORF17105P (100% identity) | CAGAG | Sen74ORF16750P |
| 16750 | M | M.SenS707ORF17415P (100% identity) | CAGAG | M.Sen74ORF16750P |
| 16755 | MFS transporter | |||
| 19150 | DEAD/DEAH box helicase | |||
| 19155 | M | M.Sen795ORF14550P (99% identity) | M.Sen74ORF19155P | |
| 19160 | R | SenS707ORF15115P (99% identity) | Sen74ORF19155P | |
| 19165 | 100 aa hypothetical protein | |||