Salmonella species SJTUF14152 |
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Putative Salmonella species SJTUF14152 RM systems
Ref: Zhang,Z. et al. unpublished
REBASE ref # 31586
Complete sequence: 4,995,432 bp
GenBank #: CP064671
REBASE acronym: Sensp14152
Org_num: 45955
All begin IVP15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21800 | AAA family ATPase | |||
| 21805 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sensp14152ORF21810P |
| 21810 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sensp14152ORF21810P |
| 21815 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Sensp14152ORF21810P |
| 21820 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.Sensp14152DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.SenMC56ORF2240P (100% identity) | ATGCAT | M.Sensp14152ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3130 | DUF3850 domain-containing protein | |||
| 3135 | M | M.SspZ54ORF6040P (100% identity) | M.Sensp14152ORF3135P | |
| 3140 | replication endonuclease | |||
| 3455 | DEAD/DEAH box helicase | |||
| 3460 | RM | SflLIN17ORF3140P (100% identity) | Sensp14152ORF3460P | |
| 3465 | transposase | |||
| 9965 | phosphohydrolase | |||
| 9970 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sensp14152DcmP |
| 9975 | V | V.Sensp14178DcmP (100% identity) | V.Sensp14152DcmP | |
| 9980 | drug/metabolite exporter YedA | |||
| 18585 | DUF1317 family protein | |||
| 18590 | M | M.SensS90ORFHP (100% identity) | M.Sensp14152ORF18590P | |
| 18595 | 74 aa hypothetical protein | |||
| 20790 | YebC/PmpR family DNA-binding transcriptional | |||
| 20795 | R | Sensp14178ORF19855P (100% identity) | Sensp14152ORF20795P | |
| 20800 | 347 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17820 | 33 aa hypothetical protein | |||
| 17825 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sensp14152ORF17835P |
| 17830 | IS1 family transposase | |||
| 17835 | M | M.SenSI174ORF17820P (100% identity) | CAGAG | M.Sensp14152ORF17835P |
| 17840 | MFS transporter | |||
| 20865 | S8 family peptidase | |||
| 20870 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.Sensp14152ORF20870P |
| 20875 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | Sensp14152ORF20870P |
| 20880 | integrase arm-type DNA-binding domain-containing | |||