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Putative Escherichia coli O157:H7 Wll001 RM systems
Ref: Wang,L. unpublished
REBASE ref # 29098
Sequence length: | GenBank #: | |
Chromosome: | 5,487,634 bp | CP064167 |
plasmid unnamed2: | 95,164 bp | CP064169 |
REBASE acronym: Eco11001
Org_num: 45832
All begin IMX21_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11875 | DUF262 domain-containing protein | |||
11880 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco11001ORF11885P |
11885 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco11001ORF11885P |
11890 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco11001ORF11885P |
11895 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1240 | TrmB family transcriptional regulator | |||
1245 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco11001ORF1245P | |
1260 | DUF1737 domain-containing protein | |||
2120 | 81 aa hypothetical protein | |||
2125 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco11001ORF2125P | |
2130 | 329 aa hypothetical protein | |||
2135 | R | Ecos15739ORF2910P (100% identity) | Eco11001ORF2125P | |
2140 | DUF1367 family protein | |||
5900 | drug/metabolite exporter YedA | |||
5905 | V | V.EcosPA8DcmP (100% identity) | V.Eco11001DcmP | |
5910 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11001DcmP |
5915 | phosphohydrolase | |||
12110 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco11001ORF12110P |
12115 | DEAD/DEAH box helicase | |||
12145 | N-acetylneuraminic acid mutarotase | |||
12150 | R | Ecos1613ORF26795P (100% identity) | Eco11001ORF12150P | |
12155 | transposase | |||
17150 | cell division protein DamX | |||
17155 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11001DamP |
17160 | ribulose-phosphate 3-epimerase | |||
17665 | DUF2556 family protein | |||
17670 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco11001ORF17670P |
17675 | DNA-binding transcriptional regulator Fis | |||
23865 | recombination protein NinB | |||
23870 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco11001ORF23870P |
23875 | NinE family protein | |||
25540 | recombination protein NinB | |||
25545 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco11001ORF25545P |
25550 | NinE family protein | |||
plasmid unnamed2 | ||||
27550 | 73 aa hypothetical protein | |||
27555 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco11001ORF27555P | |
27560 | 101 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11895 | endoribonuclease SymE | |||
11900 | R | EcosPA8GmrSDP (55% identity) | Eco11001GmrDP | |
11905 | R | Ecos1613GmrSP (100% identity) | Eco11001GmrSP | |
11910 | DUF1127 domain-containing protein |