Ref: Chen,L. unpublished

REBASE ref # 24842

Sequence length:GenBank #:
Chromosome: 2,715,577 bp CP063443
plasmid pY80: 55,758 bp CP063444

REBASE acronym: Sha80P

Org_num: 45727

 

All begin IOD51_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
6045 73 aa hypothetical protein
6050 R ShaVSI35ORF400P (100% identity) Sha80PORF6060P
6055 S S.ShaVSI35ORF400P (100% identity) S.Sha80PORF6060P
6060 M M.ShaVSI35ORF400P (100% identity) M.Sha80PORF6060P
6065 270 aa hypothetical protein
 
7100 RNA-directed DNA polymerase
7105 S S.Saupt246ORF145P (52% identity) S.Sha80PORF7110P
7110 M M.SspS172ORF960P (98% identity) M.Sha80PORF7110P
7115 R SepM9FORFAP (99% identity) Sha80PORF7110P
7120 zinc-ribbon domain-containing protein
 
plasmid pY80
 
13470 MFS transporter
13180 S S.LplZFM9ORF16735P (45% identity) S.Sha80PORF13185P
13185 M M.LplZFM9ORF16735P (99% identity) M.Sha80PORF13185P
13190 160 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
5320 type I toxin-antitoxin system Fst family toxin
??? M M.ShaPK01ORF12905P (93% identity) M.Sha80PORF5325P
5330 AAA family ATPase
 
5600 IS6 family transposase
5605 RM MscC2865ORF15270P (80% identity) Sha80PORF5605P
5610 restriction endonuclease
 
5855 SIR2 family protein
5860 RM Sde27941ORF245P (74% identity) Sha80PORF5860P
5865 72 aa hypothetical protein
 
6180 DUF1541 domain-containing protein
6185 RM Mca150ORF485P (96% identity) Sha80PORF6185P
6190 74 aa hypothetical protein
 
8770 UTP--glucose-1-phosphate uridylyltransferase
8775 R ShaSHO6ORFAP (87% identity) Sha80PORF8780P
8780 M M.ShaSHO6ORFAP (94% identity) M.Sha80PORF8780P
8785 229 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
6515 Cof-type HAD-IIB family hydrolase
6520 R ScaH17McrBP (82% identity) Sha80PMcrBP
6525 R ScaH17McrCP (86% identity) Sha80PMcrCP
6530 PrsW family intramembrane metalloprotease
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