Salmonella enterica subsp. enterica serovar Typhimurium R17.1451 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium R17.1451 RM systems
Ref: Chiou,C.-S. et al. unpublished
REBASE ref # 28599
| Sequence length: | GenBank #: | |
| Chromosome: | 4,790,379 bp | CP063294 |
| plasmid pR17.1451_p102k: | 102,507 bp | CP063296 |
| plasmid pR17.1451_p159k: | 159,330 bp | CP063295 |
REBASE acronym: Sen1451
Org_num: 45714
All begin IN819_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19695 | restriction endonuclease | |||
| 19700 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1451ORF19705P |
| 19705 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1451ORF19705P |
| 19710 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1451ORF19705P |
| 19715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen1451DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1451ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 9030 | phosphohydrolase | |||
| 9035 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1451DcmP |
| 9040 | V | V.StyUK1DcmP (100% identity) | V.Sen1451DcmP | |
| 9045 | drug/metabolite exporter YedA | |||
| 19855 | BREX system P-loop protein BrxC | |||
| 19860 | RM | StyUK1IV (100% identity) | GATCAG | Sen1451ORF19860P |
| 19865 | AAA family ATPase | |||
| plasmid pR17.1451_p102k | ||||
| 24265 | 103 aa hypothetical protein | |||
| 24270 | M | M.SspPIBORF23080P (100% identity) | M.Sen1451ORF24270P | |
| 24275 | 73 aa hypothetical protein | |||
| plasmid pR17.1451_p159k | ||||
| 23875 | 100 aa hypothetical protein | |||
| 23880 | M | M.YrupYR1ORFCP (100% identity) | M.Sen1451ORF23880P | |
| 23885 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5670 | GTPase family protein | |||
| 5675 | M | M.SenXSKORFDP (100% identity) | M.Sen1451ORF5675P | |
| 5680 | R | SenXSKORFDP (100% identity) | Sen1451ORF5675P | |
| 5685 | inovirus Gp2 family protein | |||
| 17135 | 33 aa hypothetical protein | |||
| 17140 | R | StyUK1IP (99% identity) | CAGAG | Sen1451ORF17145P |
| 17145 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1451ORF17145P |
| 17150 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19690 | BrnT family toxin | |||
| 19695 | R | StyUK1MrrP (100% identity) | Sen1451MrrP | |
| 19700 | type I restriction-modification system | |||