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Putative Helicobacter cinaedi D7095 RM systems
Ref: Lane,C. unpublished
REBASE ref # 31448
Complete sequence: 2,228,396 bp
GenBank #: CP063081
REBASE acronym: Hci7095
Org_num: 45448
All begin HW260_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
10500 | Crp/Fnr family transcriptional regulator | |||
10505 | M | M.HciORF2281P (100% identity) | M.Hci7095ORF10505P | |
10510 | S | S.HciORF2281P (100% identity) | S.Hci7095ORF10505P | |
10515 | 206 aa hypothetical protein | |||
10520 | R | HciORF2281P (99% identity) | Hci7095ORF10505P | |
10525 | cation transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
50 | class II aldolase/adducin family protein | |||
55 | R | HciORF2076P (100% identity) | Hci7095ORF60P | |
60 | M | M.HciORF2076P (100% identity) | M.Hci7095ORF60P | |
65 | 53 aa hypothetical protein | |||
640 | alanine--tRNA ligase | |||
645 | M | M.HciP01DORFMP (100% identity) | M.Hci7095ORF645P | |
650 | 359 aa hypothetical protein | |||
655 | R | HciORF1958P (100% identity) | Hci7095ORF645P | |
660 | site-specific DNA-methyltransferase | |||
655 | 575 aa hypothetical protein | |||
??? | M | M2.Hci18818ORF359P (100% identity) | M1.Hci7095ORF660P | |
665 | M | M1.HciORF1953P (100% identity) | M2.Hci7095ORF660P | |
??? | R | Hci1432ORFUP (100% identity) | Hci7095ORF660P | |
675 | paraslipin | |||
805 | 173 aa hypothetical protein | |||
810 | RM | HciORF1922P (100% identity) | Hci7095ORF810P | |
815 | 106 aa hypothetical protein | |||
1550 | 242 aa hypothetical protein | |||
1555 | RM | HciORF1773P (100% identity) | Hci7095ORF1555P | |
1560 | type II toxin-antitoxin system HicB family | |||
2945 | 162 aa hypothetical protein | |||
2950 | M | M.Hci798ORFDP (100% identity) | M.Hci7095ORF2950P | |
2955 | R | HciORF1543P (100% identity) | Hci7095ORF2950P | |
2960 | 51 aa hypothetical protein | |||
4815 | lipoprotein signal peptidase | |||
??? | RM | Hci611ORF903P (99% identity) | Hci7095ORF4820P | |
4830 | RNA helicase | |||
4955 | adenine specific DNA methyltransferase | |||
4960 | RM | HciORF1047P (98% identity) | Hci7095ORF4960P | |
4965 | arginyltransferase | |||
5435 | RDD family protein | |||
5440 | M | M.Hci629ORFTP (100% identity) | M.Hci7095ORF5440P | |
5445 | DUF262 domain-containing protein | |||
5525 | glutamine-hydrolyzing GMP synthase | |||
5530 | M | M.HciORF922P (100% identity) | M.Hci7095ORF5530P | |
??? | R | HciORF922P (99% identity) | Hci7095ORF5530P | |
5540 | [cytidine(C)-cytidine(C)-adenosine (A)]-adding | |||
6140 | PLP-dependent transferase | |||
6145 | M | M.HciORF793P (100% identity) | M.Hci7095ORF6145P | |
??? | R | HciORF793P (99% identity) | Hci7095ORF6145P | |
6160 | cysteine synthase family protein | |||
6170 | 223 aa hypothetical protein | |||
6175 | M | M.HciORF787P (100% identity) | M.Hci7095ORF6175P | |
6180 | 54 aa hypothetical protein | |||
6180 | 54 aa hypothetical protein | |||
??? | M | M.Hci1432ORFOP (100% identity) | M.Hci7095ORF6185P | |
6190 | HNH endonuclease | |||
6375 | flagellin modification protein PseA | |||
6380 | R | HciORF741P (100% identity) | Hci7095ORF6385P | |
6385 | M | M.HciORF741P (100% identity) | M.Hci7095ORF6385P | |
6390 | cell division protein FtsW | |||
7665 | cysteine desulfurase, NifS family | |||
??? | M | M.Hci197ORF1075P (100% identity) | M.Hci7095ORF7670P | |
7675 | R | HciORF474P (100% identity) | Hci7095ORF7670P | |
7680 | iron-sulfur cluster assembly scaffold protein | |||
8125 | 249 aa hypothetical protein | |||
8130 | M | M.HciP01DORFBP (100% identity) | M.Hci7095ORF8130P | |
8135 | class I SAM-dependent methyltransferase | |||
9545 | 30S ribosomal protein S2 | |||
9550 | M | M.HciORF102P (100% identity) | M.Hci7095ORF9550P | |
9555 | heme ABC transporter substrate-binding protein | |||
9560 | R | Hci629ORFAP (49% identity) | Hci7095ORF9550P | |
9565 | RNA polymerase factor sigma-54 | |||
9920 | restriction endonuclease subunit S | |||
9925 | RM | Hci1432ORFKP (98% identity) | Hci7095ORF9925P | |
9930 | NAD(P)-dependent alcohol dehydrogenase | |||
10485 | 4Fe-4S dicluster domain-containing protein | |||
10490 | M | M.Hci798ORFGP (97% identity) | M.Hci7095ORF10490P | |
10495 | 214 aa hypothetical protein | |||
10540 | argininosuccinate synthase | |||
10545 | M | M.HciP01DORFGP (100% identity) | M.Hci7095ORF10545P | |
10550 | R | HciP01DORFGP (100% identity) | Hci7095ORF10545P | |
10555 | septum site-determining protein MinD | |||
10915 | MFS transporter | |||
10920 | M | M2.HciORF2198P (100% identity) | M1.Hci7095ORF10920P | |
10925 | M | M1.HciORF2198P (100% identity) | M2.Hci7095ORF10920P | |
10930 | Hpy99I family type II restriction endonuclease | |||
10925 | Dam family site-specific | |||
10930 | R | HciORF2196P (100% identity) | Hci7095ORF10935P | |
10935 | M | M.HciORF2196P (100% identity) | M.Hci7095ORF10935P | |
10940 | 79 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3050 | restriction endonuclease | |||
3055 | M | M.HciORF1430P (100% identity) | M.Hci7095ORF3055P | |
3060 | R | Hci18818ORFZP (100% identity) | Hci7095ORF3055P | |
3065 | 45 aa hypothetical protein | |||
9735 | cache domain-containing protein | |||
9740 | R | Hci60917ORF215P (100% identity) | Hci7095ORF9755P | |
9745 | virulence RhuM family protein | |||
9750 | ATP-binding protein | |||
9755 | M | M.HciORF61P (100% identity) | M.Hci7095ORF9755P | |
9760 | saccharopine dehydrogenase family protein | |||
10950 | MerR family transcriptional regulator | |||
10955 | R | HciORF2191P (100% identity) | Hci7095ORF10960P | |
10960 | M | M.Cph21ORF136P (52% identity) | M.Hci7095ORF10960P | |
10965 | aldo/keto reductase |