Streptococcus suis LSM178 |
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Putative Streptococcus suis LSM178 RM systems
Ref: Li,J. and Dong,X. unpublished
REBASE ref # 31434
Complete sequence: 2,115,437 bp
GenBank #: CP047248
REBASE acronym: SsuLSM178
Org_num: 45385
All begin GRI05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5990 | 243 aa hypothetical protein | |||
| 5995 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsuLSM178ORF6000P |
| 6000 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsuLSM178ORF6000P |
| 6005 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsuLSM178ORF6000P |
| 6010 | FAD-containing oxidoreductase | |||
| 6860 | ribose-5-phosphate isomerase RpiA | |||
| 6865 | S | S2.SsucSS389ORF6590P (100% identity) | S2.SsuLSM178ORF6875P | |
| 6870 | S | S2.SsuiS10ORFBP (100% identity) | S1.SsuLSM178ORF6875P | |
| 6875 | M | M.SsuiS10ORFBP (100% identity) | M.SsuLSM178ORF6875P | |
| 6880 | R | SsuiS10ORFBP (99% identity) | SsuLSM178ORF6875P | |
| 6885 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 8455 | serine--tRNA ligase | |||
| 8460 | M | M.SsuiS10ORFAP (100% identity) | M.SsuLSM178ORF8460P | |
| 8465 | S | S.SsuiS10ORFAP (100% identity) | S.SsuLSM178ORF8460P | |
| 8470 | R | SsuiS10ORFAP (100% identity) | SsuLSM178ORF8460P | |
| 8475 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4680 | 31 aa hypothetical protein | |||
| 4685 | M | M.SsuSS21ORFDP (100% identity) | M.SsuLSM178ORF4685P | |
| 4690 | 142 aa hypothetical protein | |||
| 9550 | 78 aa hypothetical protein | |||
| 9555 | M | M.SsuFJSM5ORF11685P (98% identity) | M.SsuLSM178ORF9555P | |
| 9560 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6045 | IS200/IS605 family transposase | |||
| 6050 | R | SsuiS10ORFEP (100% identity) | SsuLSM178ORF6055P | |
| ??? | M | M.SsuSs45ORF2350P (100% identity) | M.SsuLSM178ORF6055P | |
| 6065 | 63 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5250 | glutamine-hydrolyzing GMP synthase | |||
| 5255 | R | SsucSS389McrCP (100% identity) | SsuLSM178McrCP | |
| 5260 | R | SsuiS10McrBP (100% identity) | SsuLSM178McrBP | |
| 5265 | 262 aa hypothetical protein | |||