Escherichia coli 20R2R |
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Putative Escherichia coli 20R2R RM systems
Ref: Uhlich,G.A. et al. unpublished
REBASE ref # 31350
| Sequence length: | GenBank #: | |
| Chromosome: | 5,498,557 bp | CP062160 |
| plasmid punnamed1: | 104,844 bp | CP062161 |
REBASE acronym: Eco20R2R
Org_num: 45054
All begin IEM32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4850 | endoribonuclease SymE | |||
| 4855 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco20R2RORF4860P |
| 4860 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco20R2RORF4860P |
| 4865 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco20R2RORF4860P |
| 4870 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4590 | transposase | |||
| 4595 | R | Ecos1613ORF26795P (100% identity) | Eco20R2RORF4595P | |
| 4600 | N-acetylneuraminic acid mutarotase | |||
| 4630 | DEAD/DEAH box helicase | |||
| 4635 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco20R2RORF4635P |
| 10845 | phosphohydrolase | |||
| 10850 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco20R2RDcmP |
| 10855 | V | V.EcosPA8DcmP (100% identity) | V.Eco20R2RDcmP | |
| 10860 | drug/metabolite exporter YedA | |||
| 13930 | 81 aa hypothetical protein | |||
| 13935 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco20R2RORF13935P | |
| 13940 | 329 aa hypothetical protein | |||
| 13945 | R | Ecos15739ORF2910P (100% identity) | Eco20R2RORF13935P | |
| 13950 | DUF1367 family protein | |||
| 15485 | DUF1737 domain-containing protein | |||
| 15500 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco20R2RORF15500P | |
| 15505 | TrmB family transcriptional regulator | |||
| 18355 | NinE family protein | |||
| 18360 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco20R2RORF18360P |
| 18365 | recombination protein NinB | |||
| 25645 | DNA-binding transcriptional regulator Fis | |||
| 25650 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco20R2RORF25650P |
| 25655 | DUF2556 family protein | |||
| 26165 | ribulose-phosphate 3-epimerase | |||
| 26170 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco20R2RDamP |
| 26175 | cell division protein DamX | |||
| plasmid punnamed1 | ||||
| 27620 | 73 aa hypothetical protein | |||
| 27625 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco20R2RORF27625P | |
| 27630 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4835 | DUF1127 domain-containing protein | |||
| 4840 | R | Ecos1613GmrSP (100% identity) | Eco20R2RGmrSP | |
| 4845 | R | EcosPA8GmrSDP (55% identity) | Eco20R2RGmrDP | |
| 4850 | endoribonuclease SymE | |||