Salmonella enterica subsp. enterica serovar Typhimurium isolate S.Tm LT2p22_assembled |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium isolate S.Tm LT2p22_assembled RM systems
Ref: Zund,M. unpublished
REBASE ref # 31314
| Sequence length: | GenBank #: | |
| chromosome 1_Linear-: | 4,899,267 bp | LR881463 |
| plasmid 2_Linear-: | 93,927 bp | LR881464 |
REBASE acronym: Sen2p22
Org_num: 44782
All begin STMLT2P22_CBEKMEGD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1_Linear- | ||||
| 673 | Toxic protein SymE | |||
| 674 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen2p22ORF675P |
| 675 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen2p22ORF675P |
| 676 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen2p22ORF675P |
| 677 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1_Linear- | ||||
| 642 | AAA domain, putative AbiEii toxin, Type IV TA | |||
| 643 | RM | StyUK1IV (100% identity) | GATCAG | Sen2p22ORF643P |
| 644 | 1213 aa hypothetical protein | |||
| 2788 | inner membrane transporter YedA | |||
| 2789 | V | V.StyUK1DcmP (100% identity) | V.Sen2p22DcmP | |
| 2790 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen2p22DcmP |
| 2791 | protein YedJ | |||
| 4161 | DNA-binding protein Fis | |||
| 4162 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2p22ORF4162P |
| 4163 | 54 aa hypothetical protein | |||
| 4255 | Ribulose-phosphate 3-epimerase | |||
| 4256 | M | M.StyTDamP (100% identity) | GATC | M.Sen2p22DamP |
| 4257 | Cell division protein DamX | |||
| plasmid 2_Linear- | ||||
| 4619 | 73 aa hypothetical protein | |||
| 4620 | M | M.StyUK1ORFAP (100% identity) | M.Sen2p22ORF4620P | |
| 4621 | 118 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1_Linear- | ||||
| 1162 | metabolite transport protein YjhB | |||
| 1163 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen2p22ORF1163P |
| 1164 | R | StyUK1IP (99% identity) | CAGAG | Sen2p22ORF1163P |
| 1165 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1_Linear- | ||||
| 676 | Type III restriction enzyme, res subunit | |||
| 677 | R | StyUK1MrrP (100% identity) | Sen2p22MrrP | |
| 678 | Ribonuclease toxin, BrnT, of type II | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1_Linear- | ||||
| 3507 | Bacteriophage replication gene A protein (GPA) | |||
| 3508 | M | M.StyLTORF13745P (100% identity) | M.Sen2p22ORF3508P | |
| 3509 | protein YbiI | |||