Escherichia coli O145 RM12275-C1 |
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Putative Escherichia coli O145 RM12275-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
| Sequence length: | GenBank #: | |
| Chromosome: | 5,408,598 bp | CP031341 |
| plasmid pRM12275-C1: | 88,744 bp | CP031340 |
REBASE acronym: Eco12275
Org_num: 44679
All begin DXE55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12880 | M48 family metallopeptidase | |||
| 12885 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco12275ORF12905P |
| 12890 | cold shock domain-containing protein | |||
| 12895 | YecA family protein | |||
| 12900 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco12275ORF12905P |
| 12905 | M | M.EcoSO173ORF28895P (85% identity) | GATGNNNNNNTAC | M.Eco12275ORF12905P |
| 12910 | protein sbmA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4430 | recombination protein NinB | |||
| 4435 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco12275ORF4435P |
| 4440 | NinE family protein | |||
| 6360 | recombination protein NinB | |||
| 6365 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco12275ORF6365P |
| 6370 | NinE family protein | |||
| 11030 | DUF1737 domain-containing protein | |||
| 11040 | M | M.EcoTWORF1742P (100% identity) | M.Eco12275ORF11040P | |
| 11045 | TrmB family transcriptional regulator | |||
| 13480 | drug/metabolite exporter YedA | |||
| 13485 | V | V.SsoSE61DcmP (100% identity) | V.Eco12275DcmP | |
| 13490 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco12275DcmP |
| 13495 | phosphohydrolase | |||
| 16270 | Com family DNA-binding transcriptional | |||
| 16275 | M | M.EcoM9ORF12010P (100% identity) | M.Eco12275ORF16275P | |
| 16280 | 4-phosphoerythronate dehydrogenase | |||
| 17915 | NinE family protein | |||
| 17920 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco12275ORF17920P |
| 17925 | IS3-like element IS629 family transposase | |||
| 21155 | DNA-binding transcriptional regulator Fis | |||
| 21160 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco12275ORF21160P |
| 21165 | DUF2556 domain-containing protein | |||
| 21690 | ribulose-phosphate 3-epimerase | |||
| 21695 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12275DamP |
| 21700 | cell division protein DamX | |||
| 24915 | 77 aa hypothetical protein | |||
| 24920 | M | M.SflFF35ORF20P (100% identity) | M.Eco12275ORF24920P | |
| 24925 | 330 aa hypothetical protein | |||
| 27010 | 59 aa hypothetical protein | |||
| 27015 | R | EcoE115ORF5147P (100% identity) | Eco12275ORF27015P | |
| 27020 | N-acetylneuraminate epimerase | |||
| 27050 | DEAD/DEAH box helicase | |||
| 27055 | RM | EcoE115ORF5155P (100% identity) | Eco12275ORF27055P | |
| 27060 | IS3-like element IS629 family transposase | |||
| plasmid pRM12275-C1 | ||||
| 235 | 72 aa hypothetical protein | |||
| 240 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco12275ORF240P |
| 245 | 102 aa hypothetical protein | |||