Escherichia coli O145 RM8995-C1 |
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Putative Escherichia coli O145 RM8995-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
| Sequence length: | GenBank #: | |
| Chromosome: | 5,457,980 bp | CP031355 |
| plasmid pRM8995-C1: | 88,747 bp | CP031354 |
REBASE acronym: Eco8995
Org_num: 44684
All begin DXE49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9495 | M48 family metallopeptidase | |||
| 9500 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco8995ORF9520P |
| 9505 | cold shock domain-containing protein | |||
| 9510 | YecA family protein | |||
| 9515 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco8995ORF9520P |
| 9520 | M | M.EcoSO173ORF28895P (85% identity) | GATGNNNNNNTAC | M.Eco8995ORF9520P |
| 9525 | protein sbmA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6350 | recombination protein NinB | |||
| 6355 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco8995ORF6355P |
| 6360 | NinE family protein | |||
| 7645 | DUF1737 domain-containing protein | |||
| 7655 | M | M.EcoTWORF1742P (100% identity) | M.Eco8995ORF7655P | |
| 7660 | TrmB family transcriptional regulator | |||
| 10095 | drug/metabolite exporter YedA | |||
| 10100 | V | V.SsoSE61DcmP (100% identity) | V.Eco8995DcmP | |
| 10105 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco8995DcmP |
| 10110 | phosphohydrolase | |||
| 12890 | Com family DNA-binding transcriptional | |||
| 12895 | M | M.EcoM9ORF12010P (100% identity) | M.Eco8995ORF12895P | |
| 12900 | 4-phosphoerythronate dehydrogenase | |||
| 17910 | NinE family protein | |||
| 17915 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco8995ORF4430P |
| 17920 | IS3-like element IS629 family transposase | |||
| 21160 | DNA-binding transcriptional regulator Fis | |||
| ??? | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco8995ORF21165P |
| 21170 | DUF2556 domain-containing protein | |||
| 21695 | ribulose-phosphate 3-epimerase | |||
| 21700 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco8995DamP |
| 21705 | cell division protein DamX | |||
| 24920 | 77 aa hypothetical protein | |||
| 24925 | M | M.SflFF35ORF20P (100% identity) | M.Eco8995ORF24925P | |
| 24930 | 330 aa hypothetical protein | |||
| 27285 | 59 aa hypothetical protein | |||
| 27290 | R | EcoE115ORF5147P (100% identity) | Eco8995ORF27290P | |
| 27295 | N-acetylneuraminate epimerase | |||
| 27325 | DEAD/DEAH box helicase | |||
| 27330 | RM | EcoE115ORF5155P (100% identity) | Eco8995ORF27330P | |
| 27335 | IS3-like element IS629 family transposase | |||
| plasmid pRM8995-C1 | ||||
| 235 | 72 aa hypothetical protein | |||
| 240 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco8995ORF240P |
| 245 | 102 aa hypothetical protein | |||