Salmonella enterica subsp. enterica serovar Typhimurium LT2 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 RM systems
Ref: Sawant,K. et al. unpublished
REBASE ref # 31201
Complete sequence: 4,857,466 bp
GenBank #: CP060507
REBASE acronym: SenLT2S
Org_num: 44427
All begin H8S97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23050 | endoribonuclease SymE | |||
| 23055 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT2SORF23060P |
| 23060 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenLT2SORF23060P |
| 23065 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenLT2SORF23060P |
| 23070 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10210 | drug/metabolite exporter YedA | |||
| 10215 | V | V.StyUK1DcmP (100% identity) | V.SenLT2SDcmP | |
| 10220 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT2SDcmP |
| 10225 | phosphohydrolase | |||
| 17320 | DNA-binding transcriptional regulator Fis | |||
| 17325 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLT2SORF17325P |
| 17330 | DUF2556 family protein | |||
| 17815 | ribulose-phosphate 3-epimerase | |||
| 17820 | M | M.StyTDamP (100% identity) | GATC | M.SenLT2SDamP |
| 17825 | cell division protein DamX | |||
| 22900 | AAA family ATPase | |||
| 22905 | RM | StyUK1IV (100% identity) | GATCAG | SenLT2SORF22905P |
| 22910 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1805 | MFS transporter | |||
| 1810 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT2SORF1810P |
| 1815 | R | StyUK1IP (99% identity) | CAGAG | SenLT2SORF1810P |
| 1820 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23065 | type I restriction-modification system | |||
| 23070 | R | StyUK1MrrP (100% identity) | SenLT2SMrr2P | |
| 23075 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14010 | replication endonuclease | |||
| 14015 | M | M.StyLTORF13745P (100% identity) | M.SenLT2SORF14015P | |
| 14020 | TraR/DksA family transcriptional regulator | |||