Escherichia coli G5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli G5 RM systems
Ref: Jenjaroenpun,P. et al. unpublished
REBASE ref # 31142
| Sequence length: | GenBank #: | |
| Chromosome: | 4,844,012 bp | CP060065 |
| plasmid unnamed1: | 148,192 bp | CP060066 |
REBASE acronym: EcoG5
Org_num: 44349
All begin H4P49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9380 | 388 aa hypothetical protein | |||
| 9385 | M | M.Eco484AORF10985P (100% identity) | M.EcoG5ORF9385P | |
| 9390 | S | S.Eco16445ORF5013P (100% identity) | S.EcoG5ORF9385P | |
| 9395 | YecA family protein | |||
| 9400 | cold shock domain-containing protein | |||
| 9405 | R | Eco16445ORF5013P (100% identity) | EcoG5ORF9385P | |
| 9410 | M48 family metallopeptidase | |||
| 19645 | restriction endonuclease | |||
| 19650 | M | M.Sdy12039I (19% identity) | AGCANNNNNNTGA | M.EcoG5ORF19650AP |
| 19655 | IS1-like element IS1A family transposase | |||
| 19660 | M | M.SflSTLE3ORF19325P (81% identity) | AGCANNNNNNTGA | M.EcoG5ORF19650BP |
| 19665 | S | S.Eco16445ORF3550P (100% identity) | AGCANNNNNNTGA | S.EcoG5ORF19650P |
| 19670 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | EcoG5ORF19650P |
| 19675 | endoribonuclease SymE | |||
| plasmid unnamed1 | ||||
| 23835 | 3-phosphatase | |||
| 23840 | R | EcoXHORF21684P (21% identity) | EcoG5ORF23870BP | |
| 23845 | IS5-like element IS903B family transposase | |||
| 23850 | R | Eco16445ORF5137P (99% identity) | EcoG5ORF23870AP | |
| 23855 | S | S.Eco16445ORF5137P (98% identity) | S2.EcoG5ORF23870P | |
| 23860 | IS5-like element ISKpn26 family transposase | |||
| 23865 | S | S.Eco16445ORF5155P (98% identity) | S1.EcoG5ORF23870P | |
| 23870 | M | M.Eco16445ORF5155P (99% identity) | M.EcoG5ORF23870P | |
| 23875 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1845 | cell division protein DamX | |||
| 1850 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoG5DamP |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 2470 | DUF2556 family protein | |||
| 2475 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoG5ORF2475P |
| 2480 | DNA-binding transcriptional regulator Fis | |||
| 5495 | TraR/DksA family transcriptional regulator | |||
| 5500 | M | M.SdyFF10ORF5495P (100% identity) | GATC | M.EcoG5ORF5500P |
| 5505 | replication endonuclease | |||
| 9035 | phosphohydrolase | |||
| 9040 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoG5DcmP |
| 9045 | V | V.SsoSE61DcmP (100% identity) | V.EcoG5DcmP | |
| 9050 | drug/metabolite exporter YedA | |||
| 11120 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoG5ORF11125P | |
| 11130 | IS66-like element ISEc23 family transposase | |||
| 18175 | DEAD/DEAH box helicase | |||
| 18180 | RM | Sma1978ORFHP (99% identity) | CTTGAC | EcoG5ORF18180P |
| 18185 | IS66 family transposase | |||
| 20500 | holin | |||
| 20505 | M | M.SglORF828P (100% identity) | M.EcoG5ORF20505P | |
| 20510 | 177 aa hypothetical protein | |||
| 21590 | phage holin, lambda family | |||
| 21595 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoG5ORF21595P | |
| 21600 | TrmB family transcriptional regulator | |||