Sphingobium yanoikuyae A3 |
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Putative Sphingobium yanoikuyae A3 RM systems
Ref: Han,S.-S. unpublished
REBASE ref # 31184
| Sequence length: | GenBank #: | |
| Chromosome: | 6,531,504 bp | CP060122 |
| plasmid pSYA3-2: | 71,501 bp | CP060125 |
REBASE acronym: SyaA3
Org_num: 44392
All begin H3V42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26535 | Abi family protein | |||
| 26540 | M | M.CspsS6ORF14130P (79% identity) | M.SyaA3ORF26540P | |
| 26545 | 201 aa hypothetical protein | |||
| 26550 | S | S.PbaCA51ORF21240P (19% identity) | S.SyaA3ORF26540P | |
| 26555 | 69 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7970 | 83 aa hypothetical protein | |||
| 7975 | M | M.Rsp1511ORF20280P (80% identity) | M.SyaA3ORF7975P | |
| 7980 | AAA family ATPase | |||
| 18430 | 77 aa hypothetical protein | |||
| 18435 | M | M.SlaDS20ORF6585P (100% identity) | M.SyaA3ORF18435P | |
| 18440 | conjugal transfer protein TraW | |||
| 22000 | winged helix-turn-helix transcriptional | |||
| ??? | M | M.SyaX32ORF3200P (100% identity) | M.SyaA3ORF22005P | |
| 22010 | dihydropteroate synthase | |||
| 26835 | 69 aa hypothetical protein | |||
| 26840 | M | M.Sya25ORFCP (99% identity) | M.SyaA3ORF26840P | |
| 26845 | sodium-translocating pyrophosphatase | |||
| plasmid pSYA3-2 | ||||
| 33045 | 54 aa hypothetical protein | |||
| 33050 | M | M.SspX33ORF26800P (100% identity) | M.SyaA3ORF33050P | |
| 33055 | 358 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20300 | 125 aa hypothetical protein | |||
| 20305 | M | M.Rba1002ORFAP (13% identity) | M.SyaA3ORF20315BP | |
| 20310 | IS701 family transposase | |||
| 20315 | M | M.SzoTeo12ORF47110P (53% identity) | M.SyaA3ORF20315AP | |
| 20320 | R | SspDHS5ORF19625P (93% identity) | SyaA3ORF20315P | |
| 20325 | WYL domain-containing protein | |||