Shigella boydii 600690 |
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Putative Shigella boydii 600690 RM systems
Ref: Hazen,T.H. et al. unpublished
REBASE ref # 31130
Complete sequence: 4,820,649 bp
GenBank #: CP049278
REBASE acronym: Sbo600690
Org_num: 44220
All begin G5S56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3820 | endoribonuclease SymE | |||
| 3825 | S | S.Sbo5618ORF20135P (100% identity) | RTCANNNNNNNNRTRTC | S.Sbo600690ORF3830P |
| 3830 | M | M.Sdy49345I (97% identity) | RTCANNNNNNNNRTRTC | M.Sbo600690ORF3830P |
| 3835 | R | Sbo9733IP (100% identity) | RTCANNNNNNNNRTRTC | Sbo600690ORF3830P |
| 3840 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8630 | recombination protein NinB | |||
| 8635 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Sbo600690ORF8635P |
| 8640 | NinE family protein | |||
| 9930 | phosphohydrolase | |||
| 9935 | M | M.Sbo9733DcmP (100% identity) | CCWGG | M.Sbo600690DcmP |
| 9940 | V | V.Sbo2708DcmP (74% identity) | V.Sbo600690DcmP | |
| 9945 | drug/metabolite exporter YedA | |||
| 21755 | DNA-binding transcriptional regulator Fis | |||
| 21760 | M | M.Sbo5618ORF2345P (100% identity) | ATGCAT | M.Sbo600690ORF21760P |
| 21765 | DUF2556 family protein | |||
| 22365 | ribulose-phosphate 3-epimerase | |||
| 22370 | M | M.Sbo9733DamP (100% identity) | GATC | M.Sbo600690DamP |
| 22375 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3810 | DUF1127 domain-containing protein | |||
| 3815 | R | Sbo5618GmrSDP (100% identity) | Sbo600690GmrSDP | |
| 3820 | endoribonuclease SymE | |||