Shigella boydii 600080 |
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Putative Shigella boydii 600080 RM systems
Ref: Hazen,T.H. et al. unpublished
REBASE ref # 31130
Complete sequence: 4,559,517 bp
GenBank #: CP049606
REBASE acronym: Sbo600080
Org_num: 44218
All begin G5S61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2335 | endoribonuclease SymE | |||
| 2340 | S | S.SflPE577ORF23095P (99% identity) | GTANNNNNNNNGTCY | S.Sbo600080ORF2345P |
| 2345 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sbo600080ORF2345P |
| 2350 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sbo600080ORF2345P |
| 2355 | 87 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6950 | IS1 family transposase | |||
| 6955 | M | M.KpnTGH8ORF18000P (88% identity) | M.Sbo600080ORF6955P | |
| 6960 | replication endonuclease | |||
| 13250 | drug/metabolite exporter YedA | |||
| 13255 | V | V.SflTDcmP (100% identity) | V.Sbo600080DcmP | |
| 13260 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sbo600080DcmP |
| 13265 | phosphohydrolase | |||
| 19810 | DNA-binding transcriptional regulator Fis | |||
| 19815 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sbo600080ORF19815P |
| 19820 | DUF2556 family protein | |||
| 20355 | ribulose-phosphate 3-epimerase | |||
| 20360 | M | M.SflTDamP (100% identity) | GATC | M.Sbo600080DamP |
| 20365 | cell division protein DamX | |||