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Putative Lacibacter species S13-6-6 RM systems
Ref: Jin,L. unpublished
REBASE ref # 29107
Complete sequence: 5,119,652 bp
GenBank #: CP060007
REBASE acronym: LspS1366
Org_num: 44184
All begin H4075_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9900 | DNA recombination protein RmuC | |||
9905 | M | M.MkoEYORF43250P (54% identity) | M.LspS1366ORF9905P | |
9910 | ATP-binding protein | |||
16660 | DNA polymerase/3-5 exonuclease PolX | |||
16665 | M | M1.HensORFGP (22% identity) | M.LspS1366ORF16665P | |
16670 | 456 aa hypothetical protein | |||
19875 | RNA-directed DNA polymerase | |||
19880 | RM | FspLCS9ORF9130P (69% identity) | LspS1366ORF19880P | |
19885 | DEAD/DEAH box helicase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
9925 | PD-(D/E)XK nuclease family protein | |||
9930 | M | M.CspGPA1ORF12325P (44% identity) | M.LspS1366ORF9930P | |
9935 | R | Fsp83ORFBP (73% identity) | LspS1366ORF9930P | |
9940 | 212 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
8070 | AAA family ATPase | |||
8075 | R | CspPOL2McrBP (45% identity) | LspS1366McrBP | |
8080 | R | Fsp36791McrCP (74% identity) | LspS1366McrCP | |
8085 | RteC domain-containing protein |