Escherichia coli MOD1-ECOR39 |
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Putative Escherichia coli MOD1-ECOR39 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,284,758 bp
GenBank #: QOXY00000000 (NZ_QOXY00000000)
REBASE acronym: EcoR39
Org_num: 43985
All begin A6583_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23450 | DNA-binding protein | |||
| 23455 | M | M.Ecos641ORF18845P (100% identity) | M.EcoR39ORF23455P | |
| 23460 | S | S.EcoWH398ORF26840P (100% identity) | S.EcoR39ORF23455P | |
| 23465 | R | EcoW087ORF4400P (100% identity) | EcoR39ORF23455P | |
| 23470 | lactate utilization protein C | |||
| 8705 | DUF262 domain-containing protein | |||
| 8710 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | EcoR39ORF8715P |
| 8715 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.EcoR39ORF8715P |
| 8720 | S | S.EcoR38ORF9990P (100% identity) | CAAYNNNNNNNNTGAG | S.EcoR39ORF8715P |
| 8725 | endoribonuclease SymE | |||
| 8950 | 128 aa hypothetical protein | |||
| 8955 | M | M.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | M.EcoR39ORF8955P |
| 8960 | S | S.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | S.EcoR39ORF8955P |
| 8965 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 70 | phosphohydrolase | |||
| 75 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.EcoR39DcmP |
| 80 | V | V.SflC32DcmP (74% identity) | V.EcoR39DcmP | |
| 85 | EamA family transporter | |||
| 24295 | TrmB family transcriptional regulator | |||
| 24300 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoR39ORF24300P |
| 24320 | 73 aa hypothetical protein | |||
| 21000 | 121 aa hypothetical protein | |||
| 21005 | R | Sso8033ORF3755P (99% identity) | EcoR39ORF21010P | |
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoR39ORF21010P | |
| 21015 | 257 aa hypothetical protein | |||
| 19825 | 89 aa hypothetical protein | |||
| 19830 | M | M.EcoECOR39ORF44P (100% identity) | M.EcoR39ORF19830P | |
| 19840 | 92 aa hypothetical protein | |||
| 19530 | Fis family transcriptional regulator | |||
| 19535 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoR39ORF19535P |
| 19540 | DUF2556 domain-containing protein | |||
| 495 | AAA family ATPase | |||
| 500 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.EcoR39ORF500P |
| 505 | replication endonuclease | |||
| 8930 | HNH endonuclease | |||
| 8935 | R | EcosB2CORFAP (100% identity) | EcoR39ORF8935P | |
| 8940 | restriction endonuclease | |||
| 5035 | cell division protein DamX | |||
| 5040 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR39DamP |
| 5045 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8725 | endoribonuclease SymE | |||
| ??? | R | EcoR41GmrSDP (100% identity) | EcoR39GmrSDP | |
| 8740 | 26 aa hypothetical protein | |||
| 8935 | HNH endonuclease | |||
| 8940 | R | EcoSP46McrBP (100% identity) | EcoR39McrBP | |
| 8945 | R | EcoSP5McrCP (100% identity) | EcoR39McrCP | |
| 8950 | 128 aa hypothetical protein | |||