Salmonella enterica CFSAN071983 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica CFSAN071983 RM systems
Ref: Lomonaco,S. unpublished
REBASE ref # 31050
Contig set: 4,995,973 bp
GenBank #: QUVI00000000 (NZ_QUVI00000000)
REBASE acronym: Sen71983
Org_num: 43949
All begin CV986_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17175 | Fic family protein | |||
| 17180 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen71983ORF17190P |
| 17185 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen71983ORF17190P |
| 17190 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen71983ORF17190P |
| 17195 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen71983ORF17190P |
| 17200 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22830 | thermonuclease family protein | |||
| ??? | M | M.Sens770ORF21675P (100% identity) | M.Sen71983ORF22835P | |
| 22840 | 56 aa hypothetical protein | |||
| 25595 | 97 aa hypothetical protein | |||
| 25600 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen71983ORF25600P |
| 25605 | DUF87 domain-containing protein | |||
| 40 | phosphohydrolase | |||
| 45 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen71983DcmP |
| 50 | V | V.StyUK1DcmP (100% identity) | V.Sen71983DcmP | |
| 55 | drug/metabolite exporter YedA | |||
| 25490 | ribulose-phosphate 3-epimerase | |||
| 25495 | M | M.StyTDamP (100% identity) | GATC | M.Sen71983DamP |
| 25500 | cell division protein DamX | |||
| 19285 | DUF262 domain-containing protein | |||
| 19290 | R | SspS13ORF1655P (100% identity) | Sen71983ORF19295P | |
| 19295 | M | M.SspS13ORF1655P (100% identity) | M.Sen71983ORF19295P | |
| 19300 | replication endonuclease | |||
| 2915 | replication endonuclease | |||
| 2920 | M | M.SenS0722ORF17610P (100% identity) | GATC | M.Sen71983ORF2920P |
| 2925 | TraR/DksA family transcriptional regulator | |||
| 24475 | Fis family transcriptional regulator | |||
| 24480 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen71983ORF24480P |
| 24485 | DUF2556 domain-containing protein | |||
| 20050 | 273 aa hypothetical protein | |||
| 20055 | M | M.Sens770ORF22135P (100% identity) | M.Sen71983ORF20055P | |
| 20060 | DNA-binding protein | |||
| 17160 | 69 aa hypothetical protein | |||
| 17165 | R | SenS12VPHORF11355P (100% identity) | Sen71983ORF17165P | |
| 17170 | FosA7 family fosfomycin resistance glutathione | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10605 | 33 aa hypothetical protein | |||
| 10610 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen71983ORF10615P |
| 10615 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen71983ORF10615P |
| 10620 | MFS transporter | |||