Salmonella enterica CFSAN071980 |
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Putative Salmonella enterica CFSAN071980 RM systems
Ref: Lomonaco,S. unpublished
REBASE ref # 31050
Contig set: 5,007,268 bp
GenBank #: QUVF00000000 (NZ_QUVF00000000)
REBASE acronym: Sen71980
Org_num: 43946
All begin CV983_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16650 | toll/interleukin-1 receptor domain-containing | |||
| 16655 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen71980ORF16655P |
| 16660 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen71980ORF16655P |
| 16665 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen71980ORF16655P |
| 16670 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen71980ORF16655P |
| 16675 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25650 | 97 aa hypothetical protein | |||
| 25655 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen71980ORF25655P |
| 25660 | DUF87 domain-containing protein | |||
| 25485 | ribulose-phosphate 3-epimerase | |||
| 25490 | M | M.StyTDamP (100% identity) | GATC | M.Sen71980DamP |
| 25495 | cell division protein DamX | |||
| 16680 | FosA7 family fosfomycin resistance glutathione | |||
| 16685 | R | SenS12VPHORF11355P (100% identity) | Sen71980ORF16685P | |
| 16690 | 69 aa hypothetical protein | |||
| 24175 | DNA-binding protein | |||
| 24180 | M | M.Sens770ORF22135P (100% identity) | M.Sen71980ORF24180P | |
| 24185 | 273 aa hypothetical protein | |||
| 24685 | Fis family transcriptional regulator | |||
| 24690 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen71980ORF24690P |
| 24695 | DUF2556 domain-containing protein | |||
| 20500 | thermonuclease family protein | |||
| ??? | M | M.Sens770ORF21675P (100% identity) | M.Sen71980ORF20505P | |
| 20510 | 56 aa hypothetical protein | |||
| 5265 | TraR/DksA family transcriptional regulator | |||
| 5270 | M | M.SenS0722ORF17610P (100% identity) | GATC | M.Sen71980ORF5270P |
| 5275 | replication endonuclease | |||
| 2730 | drug/metabolite exporter YedA | |||
| 2735 | V | V.StyUK1DcmP (100% identity) | V.Sen71980DcmP | |
| 2740 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen71980DcmP |
| 2745 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9150 | MFS transporter | |||
| 9155 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen71980ORF9155P |
| 9160 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen71980ORF9155P |
| 9165 | 33 aa hypothetical protein | |||