Salmonella enterica CFSAN071960 |
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Putative Salmonella enterica CFSAN071960 RM systems
Ref: Lomonaco,S. unpublished
REBASE ref # 31050
Contig set: 4,813,521 bp
GenBank #: QUUN00000000 (NZ_QUUN00000000)
REBASE acronym: Sen71960
Org_num: 43927
All begin CV998_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9710 | 322 aa hypothetical protein | |||
| 9715 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen71960ORF9720P |
| 9720 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen71960ORF9720P |
| 9725 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen71960ORF9720P |
| 9730 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24460 | protein ninD | |||
| 24465 | M | M.Sen71971ORF13085P (100% identity) | M.Sen71960ORF24465P | |
| 24470 | recombination protein NinB | |||
| 16710 | ribulose-phosphate 3-epimerase | |||
| 16715 | M | M.StyTDamP (100% identity) | GATC | M.Sen71960DamP |
| 16720 | cell division protein DamX | |||
| 4880 | replication endonuclease | |||
| 4885 | M | M.SenSMB30RaORF14970P (100% identity) | M.Sen71960ORF4885P | |
| 4890 | TraR/DksA family transcriptional regulator | |||
| 4945 | 470 aa hypothetical protein | |||
| 4950 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.Sen71960ORF4950P |
| 4955 | zinc ribbon domain-containing protein | |||
| 18135 | phosphohydrolase | |||
| 18140 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen71960DcmP |
| 18145 | V | V.StyUK1DcmP (100% identity) | V.Sen71960DcmP | |
| 18150 | drug/metabolite exporter YedA | |||
| 9890 | 75 aa hypothetical protein | |||
| 9895 | M | M.SenXB08ORF19920P (99% identity) | RCCGGY | M.Sen71960ORF9895P |
| 9900 | histidine kinase | |||
| 9905 | 607 aa hypothetical protein | |||
| 9910 | R | SenXB08ORF19940P (100% identity) | Sen71960ORF9895P | |
| 9915 | 97 aa hypothetical protein | |||
| 8055 | replication endonuclease | |||
| 8060 | M | M.SenS976ORF3185P (100% identity) | M.Sen71960ORF8060P | |
| 8065 | DUF3850 domain-containing protein | |||
| 9015 | Fis family transcriptional regulator | |||
| 9020 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen71960ORF9020P |
| 9025 | DUF2556 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12725 | 33 aa hypothetical protein | |||
| 12730 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen71960ORF12735P |
| 12735 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen71960ORF12735P |
| 12740 | MFS transporter | |||