Salmonella enterica CFSAN071958 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica CFSAN071958 RM systems
Ref: Lomonaco,S. unpublished
REBASE ref # 31050
Contig set: 4,690,445 bp
GenBank #: QUUL00000000 (NZ_QUUL00000000)
REBASE acronym: Sen71958
Org_num: 43925
All begin CV964_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4275 | 322 aa hypothetical protein | |||
| 4280 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen71958ORF4285P |
| 4285 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen71958ORF4285P |
| 4290 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen71958ORF4285P |
| 4295 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | DUF2556 domain-containing protein | |||
| 40 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen71958ORF40P |
| 45 | Fis family transcriptional regulator | |||
| 11740 | ribulose-phosphate 3-epimerase | |||
| 11745 | M | M.StyTDamP (100% identity) | GATC | M.Sen71958DamP |
| 11750 | cell division protein DamX | |||
| 20470 | phosphohydrolase | |||
| 20475 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen71958DcmP |
| 20480 | V | V.StyUK1DcmP (100% identity) | V.Sen71958DcmP | |
| 20485 | drug/metabolite exporter YedA | |||
| 4455 | 75 aa hypothetical protein | |||
| 4460 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.Sen71958ORF4460P |
| 4465 | histidine kinase | |||
| 4470 | 607 aa hypothetical protein | |||
| 4475 | R | SenXB08ORF19940P (100% identity) | Sen71958ORF4460P | |
| 4480 | 97 aa hypothetical protein | |||
| 3435 | zinc ribbon domain-containing protein | |||
| 3440 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.Sen71958ORF3440P |
| 3445 | 470 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11270 | 33 aa hypothetical protein | |||
| 11275 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen71958ORF11280P |
| 11280 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen71958ORF11280P |
| 11285 | MFS transporter | |||