Escherichia coli RHB01-C20 |
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Putative Escherichia coli RHB01-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,411,037 bp | CP055981 |
| plasmid pRHB01-C20_3: | 85,330 bp | CP055983 |
REBASE acronym: Eco01C20
Org_num: 43624
All begin HVV39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15870 | 428 aa hypothetical protein | |||
| 15875 | S | S.EcoTrh52ORF17850P (16% identity) | S2.Eco01C20ORF15885P | |
| 15880 | S | S.EcoTrh52ORF17850P (41% identity) | S1.Eco01C20ORF15885P | |
| 15885 | M | M.Eco41E2C05ORF19405P (99% identity) | M.Eco01C20ORF15885P | |
| 15890 | 128 aa hypothetical protein | |||
| 16140 | 237 aa hypothetical protein | |||
| 16145 | R | EcoTrh52ORF18120P (100% identity) | Eco01C20ORF16155P | |
| 16150 | S | S.EcoTrh52ORF18120P (100% identity) | S.Eco01C20ORF16155P | |
| 16155 | M | M.EcoS6400ORFDP (99% identity) | M.Eco01C20ORF16155P | |
| 16160 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 75 | tellurite resistance TerB family protein | |||
| 90 | M | M.EcoE15042ORF1168P (100% identity) | M.Eco01C20ORF90P | |
| 95 | TrmB family transcriptional regulator | |||
| 1105 | holin | |||
| 1115 | M | M.Eco42C22ORF1045P (99% identity) | M.Eco01C20ORF1115P | |
| 1120 | TrmB family transcriptional regulator | |||
| 2310 | holin | |||
| 2320 | M | M.Eco42C22ORF1045P (98% identity) | M.Eco01C20ORF2320P | |
| 2325 | TrmB family transcriptional regulator | |||
| 9070 | DNA-binding transcriptional regulator Fis | |||
| 9075 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco01C20ORF9075P |
| 9080 | DUF2556 family protein | |||
| 9665 | ribulose-phosphate 3-epimerase | |||
| 9670 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco01C20DamP |
| 9675 | cell division protein DamX | |||
| 15900 | AAA family ATPase | |||
| 15905 | R | EcoTrh52ORF17870P (100% identity) | Eco01C20ORF15905P | |
| 15910 | HNH endonuclease | |||
| 16385 | PerC family transcriptional regulator | |||
| 16390 | M | M.Efe41C20ORF1660P (100% identity) | GATC | M.Eco01C20ORF16390P |
| 16395 | LexA family transcriptional regulator | |||
| 18260 | 257 aa hypothetical protein | |||
| 18265 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco01C20ORF18265P | |
| 18270 | R | Sso8033ORF3755P (99% identity) | Eco01C20ORF18265P | |
| 18275 | IS3 family transposase | |||
| 20580 | recombination protein NinB | |||
| 20585 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco01C20ORF20585P |
| 20590 | NinE family protein | |||
| 22065 | phage baseplate assembly protein | |||
| 22070 | M | M.EcoBU10ORF24005P (100% identity) | M.Eco01C20ORF22070P | |
| 22080 | Hok/Gef family protein | |||
| 22400 | phosphohydrolase | |||
| 22405 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco01C20DcmP |
| 22410 | V | V.SflC32DcmP (74% identity) | V.Eco01C20DcmP | |
| 22415 | drug/metabolite exporter YedA | |||
| plasmid pRHB01-C20_3 | ||||
| 27385 | 102 aa hypothetical protein | |||
| 27390 | M | M.SenST46ORF25580P (100% identity) | M.Eco01C20ORF27390P | |
| 27395 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15890 | 128 aa hypothetical protein | |||
| 15895 | R | EcoTrh52McrCP (100% identity) | Eco01C20McrCP | |
| 15900 | R | EcoTrh52McrBP (100% identity) | Eco01C20McrBP | |
| 15905 | HNH endonuclease | |||