Escherichia coli RHB13-C24 |
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Putative Escherichia coli RHB13-C24 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,749,279 bp | CP055964 |
| plasmid pRHB13-C24_3: | 71,562 bp | CP055966 |
REBASE acronym: Eco13C24
Org_num: 43631
All begin HVW85_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5255 | DNA-binding transcriptional regulator Fis | |||
| 5260 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco13C24ORF5260P |
| 5265 | DUF2556 family protein | |||
| 5880 | ribulose-phosphate 3-epimerase | |||
| 5885 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13C24DamP |
| 5890 | cell division protein DamX | |||
| 10735 | ATP-binding protein | |||
| 10740 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco13C24ORF10740P |
| 10745 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco13C24ORF10740P |
| 10750 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco13C24ORF10740P |
| 10755 | McrC family protein | |||
| 12690 | PerC family transcriptional regulator | |||
| 12695 | M | M.EcoECO21ORF17780P (100% identity) | GATC | M.Eco13C24ORF12695P |
| 12700 | RusA family crossover junction | |||
| 14080 | TrmB family transcriptional regulator | |||
| 14085 | M | M.EcosE1ORFAP (100% identity) | M.Eco13C24ORF14085P | |
| 14090 | class II holin family protein | |||
| 15830 | TraR/DksA family transcriptional regulator | |||
| 15835 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.Eco13C24ORF15835P |
| 15840 | replication endonuclease | |||
| 21780 | drug/metabolite exporter YedA | |||
| 21785 | V | V.SsoSE61DcmP (100% identity) | V.Eco13C24DcmP | |
| 21790 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco13C24DcmP |
| 21795 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10750 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 10755 | R | EcosS9McrCP (100% identity) | Eco13C24McrCP | |
| 10760 | R | EcosS3McrBP (100% identity) | Eco13C24McrBP | |
| 10765 | glycosyltransferase family 2 protein | |||
| plasmid pRHB13-C24_3 | ||||
| 23765 | recombinase family protein | |||
| 23770 | R | Ecochi7122GmrSDP (100% identity) | Eco13C24GmrSDP | |
| 23775 | IS3-like element IS2 family transposase | |||