Escherichia coli RHB08-C21 |
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Putative Escherichia coli RHB08-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,771,837 bp | CP057957 |
| plasmid pRHB08-C21_2: | 95,782 bp | CP057958 |
REBASE acronym: Eco08C21
Org_num: 43449
All begin HVW23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19750 | 128 aa hypothetical protein | |||
| 19755 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco08C21ORF19755P |
| 19760 | S | S.EcosC41ORF5210P (99% identity) | GCAGNNNNNTGT | S.Eco08C21ORF19755P |
| 19765 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco08C21DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2175 | DUF2556 family protein | |||
| 2180 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco08C21ORF2180P |
| 2185 | DNA-binding transcriptional regulator Fis | |||
| 8990 | phosphohydrolase | |||
| 8995 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.Eco08C21DcmP |
| 9000 | V | V.SsoSE61DcmP (100% identity) | V.Eco08C21DcmP | |
| 9005 | drug/metabolite exporter YedA | |||
| 14800 | 273 aa hypothetical protein | |||
| 14805 | M | M.EfeC18ORF7705P (99% identity) | M.Eco08C21ORF14805P | |
| 14810 | TraR/DksA family transcriptional regulator | |||
| 19730 | HNH endonuclease | |||
| 19735 | R | SflN101ORF11875P (100% identity) | Eco08C21ORF19735P | |
| 19740 | AAA family ATPase | |||
| plasmid pRHB08-C21_2 | ||||
| 23225 | 73 aa hypothetical protein | |||
| 23230 | M | M.SflN92ORF24820P (100% identity) | M.Eco08C21ORF23230P | |
| 23235 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19735 | HNH endonuclease | |||
| 19740 | R | EcoSMBLMcrBP (100% identity) | Eco08C21McrBP | |
| 19745 | R | Ecows53McrCP (100% identity) | Eco08C21McrCP | |
| 19750 | 128 aa hypothetical protein | |||