Escherichia coli RHB11-C04 |
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Putative Escherichia coli RHB11-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,712,803 bp | CP057893 |
| plasmid pRHB11-C04_2: | 220,911 bp | CP057894 |
| plasmid pRHB11-C04_3: | 69,882 bp | CP057895 |
REBASE acronym: Eco11C04
Org_num: 43467
All begin HVW50_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11C04DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.Eco11C04ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 5490 | PerC family transcriptional regulator | |||
| 5495 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.Eco11C04ORF5495P |
| 5500 | LexA family transcriptional regulator | |||
| 5525 | 67 aa hypothetical protein | |||
| 5530 | M | M.EcoP61ORF17815P (100% identity) | M.Eco11C04ORF5530P | |
| 5535 | phage holin, lambda family | |||
| 8970 | phosphohydrolase | |||
| 8975 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco11C04DcmP |
| 8980 | V | V.Eco17C02DcmP (100% identity) | V.Eco11C04DcmP | |
| 8985 | drug/metabolite exporter YedA | |||
| 19575 | HNH endonuclease | |||
| 19580 | R | EcoWCTORF19980P (100% identity) | Eco11C04ORF19580P | |
| 19585 | 332 aa hypothetical protein | |||
| 19600 | BREX system P-loop protein BrxC | |||
| 19605 | RM | EcoDEC14DORF5061P (100% identity) | Eco11C04ORF19605P | |
| 19610 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pRHB11-C04_2 | ||||
| 23035 | 56 aa hypothetical protein | |||
| 23040 | M | M.Sens770ORF21675P (100% identity) | M.Eco11C04ORF23040P | |
| 23045 | thermonuclease family protein | |||
| 23665 | DNA-binding protein | |||
| 23670 | M | M.Ype21801ORF197P (100% identity) | M.Eco11C04ORF23670P | |
| 23675 | 273 aa hypothetical protein | |||
| plasmid pRHB11-C04_3 | ||||
| 24145 | 76 aa hypothetical protein | |||
| 24150 | M | M.Eco17C02ORF24500P (100% identity) | M.Eco11C04ORF24150P | |
| 24155 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB11-C04_3 | ||||
| 23805 | DUF4391 domain-containing protein | |||
| 23810 | M | M.Eco17C02ORF24160P (100% identity) | M.Eco11C04ORF23810P | |
| 23815 | R | Eco17C02ORF24160P (100% identity) | Eco11C04ORF23810P | |
| 23820 | recombinase RecA | |||