Escherichia coli RHB18-C18 |
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Putative Escherichia coli RHB18-C18 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,955,513 bp | CP057669 |
| plasmid pRHB18-C18_2: | 63,852 bp | CP057670 |
REBASE acronym: Eco18C18
Org_num: 43286
All begin HVX42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12195 | DUF4942 domain-containing protein | |||
| 12200 | M | M.SsoSE61ORF6540P (99% identity) | GACNNNNNNRTAAY | M.Eco18C18ORF12200P |
| 12205 | S | S.EcoCI5I (100% identity) | GACNNNNNNRTAAY | S.Eco18C18ORF12200P |
| 12210 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco18C18ORF12200P |
| 12215 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 935 | TrmB family transcriptional regulator | |||
| 940 | M | M.Eco42C22ORF1045P (100% identity) | M.Eco18C18ORF940P | |
| 950 | holin | |||
| 1240 | phosphohydrolase | |||
| 1245 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco18C18DcmP |
| 1250 | V | V.SsoSE61DcmP (100% identity) | V.Eco18C18DcmP | |
| 1255 | drug/metabolite exporter YedA | |||
| 7185 | replication endonuclease | |||
| 7190 | M | M.EcoUTI89ORFBP (100% identity) | GATC | M.Eco18C18ORF7190P |
| 7195 | TraR/DksA family transcriptional regulator | |||
| 11745 | RusA family crossover junction | |||
| 11750 | M | M.Sen24770ORF310P (100% identity) | GATC | M.Eco18C18ORF11750P |
| 11755 | helix-turn-helix domain-containing protein | |||
| 17140 | cell division protein DamX | |||
| 17145 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco18C18DamP |
| 17150 | ribulose-phosphate 3-epimerase | |||
| 17695 | DUF2556 family protein | |||
| 17700 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco18C18ORF17700P |
| 17705 | DNA-binding transcriptional regulator Fis | |||
| 21815 | HigA family addiction module antidote protein | |||
| 21820 | M | M.Eco47C06ORF6565P (100% identity) | M.Eco18C18ORF21820P | |
| 21825 | R | Kps623ORF16620P (100% identity) | Eco18C18ORF21820P | |
| 21830 | AAA family ATPase | |||
| plasmid pRHB18-C18_2 | ||||
| 24180 | 102 aa hypothetical protein | |||
| 24185 | M | M.EcoPK8217ORF24325P (100% identity) | M.Eco18C18ORF24185P | |
| 24190 | 73 aa hypothetical protein | |||