Escherichia coli RHB20-C04 |
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Putative Escherichia coli RHB20-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,650,387 bp | CP057638 |
| plasmid pRHB20-C04_2: | 109,773 bp | CP057639 |
REBASE acronym: Eco20C04
Org_num: 43293
All begin HVX59_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1595 | cell division protein DamX | |||
| 1600 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco20C04DamP |
| 1605 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 family protein | |||
| 2225 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco20C04ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 5295 | TraR/DksA family transcriptional regulator | |||
| 5300 | M | M.Eco4089ORF5375P (100% identity) | GATC | M.Eco20C04ORF5300P |
| 5305 | replication endonuclease | |||
| 8855 | phosphohydrolase | |||
| 8860 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco20C04DcmP |
| 8865 | V | V.SsoSE61DcmP (100% identity) | V.Eco20C04DcmP | |
| 8870 | drug/metabolite exporter YedA | |||
| 10815 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco20C04ORF10820P | |
| 10825 | IS66-like element ISEc22 family transposase | |||
| 14655 | replication endonuclease | |||
| 14660 | M | M.SflN92ORF14970P (100% identity) | GATC | M.Eco20C04ORF14660P |
| 14665 | TraR/DksA family transcriptional regulator | |||
| 19205 | HNH endonuclease | |||
| 19210 | R | SflSTLE4ORF19250P (100% identity) | Eco20C04ORF19210P | |
| 19215 | McrC family protein | |||
| plasmid pRHB20-C04_2 | ||||
| 22620 | 103 aa hypothetical protein | |||
| 22625 | M | M.SspPIBORF23080P (100% identity) | M.Eco20C04ORF22625P | |
| 22630 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19210 | HNH endonuclease | |||
| 19215 | R | SflSTLE4McrCP (100% identity) | Eco20C04McrCP | |
| 19220 | R | SflSTLE4McrBP (100% identity) | Eco20C04McrBP | |
| 19225 | DUF4942 domain-containing protein | |||